Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.47■□□□□ 0.87
RNF103-CHMP3A0A140T963 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
RNF103-CHMP3A0A140T963 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
RNF103-CHMP3A0A140T963 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.47■□□□□ 0.87
RNF103-CHMP3A0A140T963 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RNF103-CHMP3A0A140T963 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF103-CHMP3A0A140T963 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.46■□□□□ 0.87
RNF103-CHMP3A0A140T963 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF103-CHMP3A0A140T963 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RNF103-CHMP3A0A140T963 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RNF103-CHMP3A0A140T963 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.46■□□□□ 0.87
RNF103-CHMP3A0A140T963 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.46■□□□□ 0.87
RNF103-CHMP3A0A140T963 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RNF103-CHMP3A0A140T963 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.46■□□□□ 0.87
RNF103-CHMP3A0A140T963 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF103-CHMP3A0A140T963 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF103-CHMP3A0A140T963 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
RNF103-CHMP3A0A140T963 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RNF103-CHMP3A0A140T963 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
RNF103-CHMP3A0A140T963 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.45■□□□□ 0.86
RNF103-CHMP3A0A140T963 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
RNF103-CHMP3A0A140T963 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF103-CHMP3A0A140T963 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
RNF103-CHMP3A0A140T963 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF103-CHMP3A0A140T963 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF103-CHMP3A0A140T963 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.45■□□□□ 0.86
RNF103-CHMP3A0A140T963 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.45■□□□□ 0.86
RNF103-CHMP3A0A140T963 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF103-CHMP3A0A140T963 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.45■□□□□ 0.86
RNF103-CHMP3A0A140T963 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.45■□□□□ 0.86
RNF103-CHMP3A0A140T963 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.44■□□□□ 0.86
RNF103-CHMP3A0A140T963 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RNF103-CHMP3A0A140T963 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RNF103-CHMP3A0A140T963 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
RNF103-CHMP3A0A140T963 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF103-CHMP3A0A140T963 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
RNF103-CHMP3A0A140T963 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF103-CHMP3A0A140T963 SRD5A1P1-201ENST00000442297 786 ntBASIC20.44■□□□□ 0.86
RNF103-CHMP3A0A140T963 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RNF103-CHMP3A0A140T963 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.44■□□□□ 0.86
RNF103-CHMP3A0A140T963 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
RNF103-CHMP3A0A140T963 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF103-CHMP3A0A140T963 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RNF103-CHMP3A0A140T963 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
RNF103-CHMP3A0A140T963 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RNF103-CHMP3A0A140T963 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF103-CHMP3A0A140T963 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
RNF103-CHMP3A0A140T963 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF103-CHMP3A0A140T963 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.43■□□□□ 0.86
RNF103-CHMP3A0A140T963 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.43■□□□□ 0.86
RNF103-CHMP3A0A140T963 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.43■□□□□ 0.86
RNF103-CHMP3A0A140T963 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.43■□□□□ 0.86
RNF103-CHMP3A0A140T963 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF103-CHMP3A0A140T963 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.43■□□□□ 0.86
RNF103-CHMP3A0A140T963 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF103-CHMP3A0A140T963 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF103-CHMP3A0A140T963 AC244015.2-201ENST00000616358 1861 ntBASIC20.43■□□□□ 0.86
RNF103-CHMP3A0A140T963 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.43■□□□□ 0.86
RNF103-CHMP3A0A140T963 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
RNF103-CHMP3A0A140T963 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF103-CHMP3A0A140T963 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.42■□□□□ 0.86
RNF103-CHMP3A0A140T963 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF103-CHMP3A0A140T963 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.42■□□□□ 0.86
RNF103-CHMP3A0A140T963 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF103-CHMP3A0A140T963 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF103-CHMP3A0A140T963 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
RNF103-CHMP3A0A140T963 AL356441.2-201ENST00000443009 864 ntBASIC20.42■□□□□ 0.86
RNF103-CHMP3A0A140T963 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.42■□□□□ 0.86
RNF103-CHMP3A0A140T963 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.42■□□□□ 0.86
RNF103-CHMP3A0A140T963 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF103-CHMP3A0A140T963 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF103-CHMP3A0A140T963 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF103-CHMP3A0A140T963 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.42■□□□□ 0.86
RNF103-CHMP3A0A140T963 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF103-CHMP3A0A140T963 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
RNF103-CHMP3A0A140T963 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF103-CHMP3A0A140T963 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RNF103-CHMP3A0A140T963 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.41■□□□□ 0.86
RNF103-CHMP3A0A140T963 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF103-CHMP3A0A140T963 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF103-CHMP3A0A140T963 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RNF103-CHMP3A0A140T963 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF103-CHMP3A0A140T963 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RNF103-CHMP3A0A140T963 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RNF103-CHMP3A0A140T963 MIR3181-201ENST00000578512 73 ntBASIC20.41■□□□□ 0.86
RNF103-CHMP3A0A140T963 AL512631.2-201ENST00000604634 923 ntBASIC20.41■□□□□ 0.86
RNF103-CHMP3A0A140T963 AL031602.1-201ENST00000633169 911 ntBASIC20.41■□□□□ 0.86
RNF103-CHMP3A0A140T963 AC092667.1-201ENST00000434301 2586 ntBASIC20.41■□□□□ 0.86
RNF103-CHMP3A0A140T963 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RNF103-CHMP3A0A140T963 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.41■□□□□ 0.86
RNF103-CHMP3A0A140T963 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RNF103-CHMP3A0A140T963 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
RNF103-CHMP3A0A140T963 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF103-CHMP3A0A140T963 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.41■□□□□ 0.86
RNF103-CHMP3A0A140T963 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF103-CHMP3A0A140T963 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF103-CHMP3A0A140T963 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RNF103-CHMP3A0A140T963 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF103-CHMP3A0A140T963 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RNF103-CHMP3A0A140T963 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms