Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV6-7A0A0A0MS04 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV6-7A0A0A0MS04 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.84■□□□□ 0.45
TRBV6-7A0A0A0MS04 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.84■□□□□ 0.45
TRBV6-7A0A0A0MS04 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV6-7A0A0A0MS04 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.84■□□□□ 0.45
TRBV6-7A0A0A0MS04 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV6-7A0A0A0MS04 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TRBV6-7A0A0A0MS04 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC17.84■□□□□ 0.45
TRBV6-7A0A0A0MS04 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.84■□□□□ 0.45
TRBV6-7A0A0A0MS04 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TRBV6-7A0A0A0MS04 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV6-7A0A0A0MS04 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TRBV6-7A0A0A0MS04 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV6-7A0A0A0MS04 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV6-7A0A0A0MS04 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV6-7A0A0A0MS04 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
TRBV6-7A0A0A0MS04 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
TRBV6-7A0A0A0MS04 AF106564.1-201ENST00000607058 2553 ntBASIC17.84■□□□□ 0.45
TRBV6-7A0A0A0MS04 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRBV6-7A0A0A0MS04 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TRBV6-7A0A0A0MS04 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TRBV6-7A0A0A0MS04 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRBV6-7A0A0A0MS04 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRBV6-7A0A0A0MS04 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TRBV6-7A0A0A0MS04 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.83■□□□□ 0.45
TRBV6-7A0A0A0MS04 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.83■□□□□ 0.45
TRBV6-7A0A0A0MS04 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.83■□□□□ 0.44
TRBV6-7A0A0A0MS04 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
TRBV6-7A0A0A0MS04 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.83■□□□□ 0.44
TRBV6-7A0A0A0MS04 AL356740.2-201ENST00000601559 647 ntBASIC17.83■□□□□ 0.44
TRBV6-7A0A0A0MS04 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRBV6-7A0A0A0MS04 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
TRBV6-7A0A0A0MS04 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TRBV6-7A0A0A0MS04 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV6-7A0A0A0MS04 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TRBV6-7A0A0A0MS04 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV6-7A0A0A0MS04 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.82■□□□□ 0.44
TRBV6-7A0A0A0MS04 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV6-7A0A0A0MS04 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV6-7A0A0A0MS04 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV6-7A0A0A0MS04 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.82■□□□□ 0.44
TRBV6-7A0A0A0MS04 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV6-7A0A0A0MS04 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV6-7A0A0A0MS04 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.82■□□□□ 0.44
TRBV6-7A0A0A0MS04 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC17.82■□□□□ 0.44
TRBV6-7A0A0A0MS04 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV6-7A0A0A0MS04 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV6-7A0A0A0MS04 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV6-7A0A0A0MS04 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV6-7A0A0A0MS04 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV6-7A0A0A0MS04 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV6-7A0A0A0MS04 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
TRBV6-7A0A0A0MS04 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
TRBV6-7A0A0A0MS04 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV6-7A0A0A0MS04 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.81■□□□□ 0.44
TRBV6-7A0A0A0MS04 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV6-7A0A0A0MS04 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.81■□□□□ 0.44
TRBV6-7A0A0A0MS04 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
TRBV6-7A0A0A0MS04 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.81■□□□□ 0.44
TRBV6-7A0A0A0MS04 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
TRBV6-7A0A0A0MS04 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV6-7A0A0A0MS04 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV6-7A0A0A0MS04 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.81■□□□□ 0.44
TRBV6-7A0A0A0MS04 OR2I1P-207ENST00000453522 948 ntBASIC17.81■□□□□ 0.44
TRBV6-7A0A0A0MS04 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV6-7A0A0A0MS04 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV6-7A0A0A0MS04 MIR3181-201ENST00000578512 73 ntBASIC17.81■□□□□ 0.44
TRBV6-7A0A0A0MS04 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC17.81■□□□□ 0.44
TRBV6-7A0A0A0MS04 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.81■□□□□ 0.44
TRBV6-7A0A0A0MS04 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
TRBV6-7A0A0A0MS04 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
TRBV6-7A0A0A0MS04 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TRBV6-7A0A0A0MS04 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.81■□□□□ 0.44
TRBV6-7A0A0A0MS04 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
TRBV6-7A0A0A0MS04 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV6-7A0A0A0MS04 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV6-7A0A0A0MS04 LINC01006-201ENST00000333319 2292 ntBASIC17.81■□□□□ 0.44
TRBV6-7A0A0A0MS04 AC026471.6-201ENST00000622954 1905 ntBASIC17.8■□□□□ 0.44
TRBV6-7A0A0A0MS04 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.8■□□□□ 0.44
TRBV6-7A0A0A0MS04 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV6-7A0A0A0MS04 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC17.8■□□□□ 0.44
TRBV6-7A0A0A0MS04 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.8■□□□□ 0.44
TRBV6-7A0A0A0MS04 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV6-7A0A0A0MS04 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.8■□□□□ 0.44
TRBV6-7A0A0A0MS04 MIR3621-201ENST00000580529 85 ntBASIC17.8■□□□□ 0.44
TRBV6-7A0A0A0MS04 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV6-7A0A0A0MS04 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TRBV6-7A0A0A0MS04 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV6-7A0A0A0MS04 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV6-7A0A0A0MS04 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
TRBV6-7A0A0A0MS04 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.8■□□□□ 0.44
TRBV6-7A0A0A0MS04 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV6-7A0A0A0MS04 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV6-7A0A0A0MS04 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.8■□□□□ 0.44
TRBV6-7A0A0A0MS04 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
TRBV6-7A0A0A0MS04 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV6-7A0A0A0MS04 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV6-7A0A0A0MS04 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.8■□□□□ 0.44
TRBV6-7A0A0A0MS04 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms