Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 SGO1-207ENST00000425061 1213 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P04436 AL121983.2-204ENST00000430592 448 ntTSL 3 BASIC10.57□□□□□ -0.72
P04436 LINC01005-201ENST00000441691 540 ntTSL 4 BASIC10.57□□□□□ -0.72
P04436 SGO1-210ENST00000443724 931 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P04436 PLA2G6-213ENST00000447598 567 ntTSL 5 BASIC10.57□□□□□ -0.72
P04436 AC005041.2-201ENST00000448783 982 ntBASIC10.57□□□□□ -0.72
P04436 SGO1-211ENST00000452020 1162 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P04436 RN7SL709P-201ENST00000478855 300 ntBASIC10.57□□□□□ -0.72
P04436 KLF3-AS1-205ENST00000507091 642 ntTSL 3 BASIC10.57□□□□□ -0.72
P04436 AC007992.1-201ENST00000513953 953 ntBASIC10.57□□□□□ -0.72
P04436 AC034205.2-201ENST00000517788 1176 ntBASIC10.57□□□□□ -0.72
P04436 AC009034.1-201ENST00000568125 669 ntTSL 2 BASIC10.57□□□□□ -0.72
P04436 AC091027.1-201ENST00000580639 523 ntTSL 3 BASIC10.57□□□□□ -0.72
P04436 AC009271.1-201ENST00000589440 518 ntTSL 2 BASIC10.57□□□□□ -0.72
P04436 LINC00539-204ENST00000608957 869 ntTSL 5 BASIC10.57□□□□□ -0.72
P04436 ARHGAP44-212ENST00000616670 884 ntTSL 5 BASIC10.57□□□□□ -0.72
P04436 AC012065.5-201ENST00000624084 510 ntBASIC10.57□□□□□ -0.72
P04436 HMOX2-203ENST00000406590 1727 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
P04436 HSBP1-201ENST00000433866 8784 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04436 BCL2L11-223ENST00000622612 4995 ntTSL 5 BASIC10.57□□□□□ -0.72
P04436 LINC00327-201ENST00000443778 2087 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P04436 CCDC81-202ENST00000445632 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04436 SP7-201ENST00000303846 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04436 ISM2-202ENST00000342219 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04436 SRRT-215ENST00000614484 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04436 SRRT-216ENST00000618262 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04436 USP20-203ENST00000372429 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04436 TRIM36-207ENST00000513154 4218 ntTSL 2 BASIC10.57□□□□□ -0.72
P04436 MAP3K14-202ENST00000376926 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04436 TUSC5-201ENST00000333813 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04436 ARHGEF9-213ENST00000624210 1888 ntTSL 2 BASIC10.57□□□□□ -0.72
P04436 AFDN-207ENST00000400822 7593 ntTSL 5 BASIC10.57□□□□□ -0.72
P04436 LINC00654-201ENST00000379053 6113 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P04436 CLCN6-202ENST00000346436 5583 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04436 TNFAIP1-201ENST00000226225 3627 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04436 ZSCAN5A-205ENST00000587340 2450 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04436 TAF1A-AS1-201ENST00000413074 1313 ntTSL 2 BASIC10.57□□□□□ -0.72
P04436 AC092117.2-201ENST00000623937 1659 ntBASIC10.57□□□□□ -0.72
P04436 SEMA3F-206ENST00000434342 3541 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04436 CES2-202ENST00000417689 3868 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P04436 PRKG2-202ENST00000395578 3431 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
P04436 GADL1-201ENST00000282538 3759 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
P04436 CARD8-221ENST00000521613 1903 ntAPPRIS P3 TSL 5 BASIC10.56□□□□□ -0.72
P04436 AC026801.3-201ENST00000606401 1565 ntTSL 2 BASIC10.56□□□□□ -0.72
P04436 AC018645.3-201ENST00000628855 2646 ntBASIC10.56□□□□□ -0.72
P04436 SLC22A12-204ENST00000377574 3206 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P04436 UNC93A-202ENST00000366829 1810 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
P04436 VGLL4-201ENST00000273038 3725 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
P04436 CUL2-203ENST00000374749 4208 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P04436 PSMD2-205ENST00000435761 2574 ntTSL 2 BASIC10.56□□□□□ -0.72
P04436 SMG7-212ENST00000507469 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
P04436 AC111182.1-201ENST00000588701 3419 ntBASIC10.56□□□□□ -0.72
P04436 HAUS5-201ENST00000203166 4283 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P04436 SLC4A11-201ENST00000380056 3094 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
P04436 SKA3-203ENST00000400018 2745 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
P04436 C22orf31-201ENST00000216071 995 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P04436 SGK494-201ENST00000301037 1233 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
P04436 DDIT3-201ENST00000346473 906 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P04436 SNRNP35-201ENST00000350887 942 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
P04436 MRPL55-212ENST00000366739 641 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
P04436 S100A7A-202ENST00000368728 440 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
P04436 LYG2-203ENST00000409679 878 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
P04436 SNRNP35-202ENST00000412157 1140 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
P04436 AC131097.4-201ENST00000442867 571 ntTSL 4 BASIC10.56□□□□□ -0.72
P04436 AC010745.1-201ENST00000444804 637 ntTSL 3 BASIC10.56□□□□□ -0.72
P04436 AL589674.1-201ENST00000454401 222 ntTSL 5 BASIC10.56□□□□□ -0.72
P04436 AC069454.1-201ENST00000465845 468 ntBASIC10.56□□□□□ -0.72
P04436 RN7SL617P-201ENST00000485298 308 ntBASIC10.56□□□□□ -0.72
P04436 DLEU1-232ENST00000491341 1141 ntTSL 5 BASIC10.56□□□□□ -0.72
P04436 Z84723.1-201ENST00000568710 773 ntTSL 3 BASIC10.56□□□□□ -0.72
P04436 AC020913.1-202ENST00000599360 467 ntTSL 3 BASIC10.56□□□□□ -0.72
P04436 OR10G1P-201ENST00000612164 944 ntBASIC10.56□□□□□ -0.72
P04436 LINC02371-201ENST00000613818 567 ntTSL 4 BASIC10.56□□□□□ -0.72
P04436 Metazoa_SRP.76-201ENST00000619429 290 ntBASIC10.56□□□□□ -0.72
P04436 AC022730.4-201ENST00000520259 2367 ntTSL 2 BASIC10.56□□□□□ -0.72
P04436 SNHG3-202ENST00000437681 2614 ntTSL 2 BASIC10.56□□□□□ -0.72
P04436 USP1-201ENST00000339950 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P04436 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC10.56□□□□□ -0.72
P04436 AC007638.1-201ENST00000576751 1763 ntTSL 2 BASIC10.56□□□□□ -0.72
P04436 VRK3-223ENST00000601341 1777 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
P04436 FLNB-203ENST00000419752 2002 ntTSL 5 BASIC10.56□□□□□ -0.72
P04436 MIR646HG-207ENST00000432910 2043 ntTSL 2 BASIC10.56□□□□□ -0.72
P04436 DNMT3A-201ENST00000264709 9501 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
P04436 PARG-201ENST00000402038 4128 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P04436 AL645608.3-201ENST00000448179 3043 ntTSL 2 BASIC10.56□□□□□ -0.72
P04436 ETFDH-206ENST00000511912 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P04436 EPHB4-202ENST00000360620 3789 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
P04436 PPT1-219ENST00000642050 4010 ntAPPRIS P2 BASIC10.56□□□□□ -0.72
P04436 RBFOX1-214ENST00000552089 1430 ntTSL 5 BASIC10.56□□□□□ -0.72
P04436 ZNF461-213ENST00000614133 1692 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
P04436 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P04436 PLEKHG5-208ENST00000400915 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
P04436 WT1-AS-201ENST00000395900 3828 ntTSL 2 BASIC10.56□□□□□ -0.72
P04436 DLGAP4-203ENST00000373907 3337 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
P04436 CDC45-203ENST00000407835 2090 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
P04436 ADCYAP1R1-202ENST00000396211 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
P04436 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P04436 AC007741.1-201ENST00000623818 3495 ntBASIC10.56□□□□□ -0.72
P04436 BRD2-205ENST00000449085 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
P04436 ZNF248-203ENST00000395867 5141 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 200.4 ms