Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 RPL14-203ENST00000416518 812 ntTSL 3 BASIC12.15□□□□□ -0.46
SLC1A1P43005 UQCRFS1P2-201ENST00000426701 722 ntBASIC12.15□□□□□ -0.46
SLC1A1P43005 AC079742.1-201ENST00000434951 357 ntTSL 3 BASIC12.15□□□□□ -0.46
SLC1A1P43005 RARRES3-203ENST00000439013 938 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
SLC1A1P43005 HNRNPA1P30-202ENST00000440699 997 ntBASIC12.15□□□□□ -0.46
SLC1A1P43005 AL161672.1-201ENST00000450968 818 ntBASIC12.15□□□□□ -0.46
SLC1A1P43005 AL358215.1-201ENST00000481350 482 ntTSL 5 BASIC12.15□□□□□ -0.46
SLC1A1P43005 ALDOAP1-201ENST00000491506 1078 ntBASIC12.15□□□□□ -0.46
SLC1A1P43005 LINC01099-201ENST00000507011 512 ntTSL 5 BASIC12.15□□□□□ -0.46
SLC1A1P43005 CLDND1-223ENST00000511081 642 ntTSL 2 BASIC12.15□□□□□ -0.46
SLC1A1P43005 LINC01099-202ENST00000512527 578 ntTSL 2 BASIC12.15□□□□□ -0.46
SLC1A1P43005 TPD52L1-206ENST00000524679 915 ntTSL 2 BASIC12.15□□□□□ -0.46
SLC1A1P43005 ADM-204ENST00000526492 641 ntTSL 3 BASIC12.15□□□□□ -0.46
SLC1A1P43005 AC105105.4-201ENST00000610389 713 ntBASIC12.15□□□□□ -0.46
SLC1A1P43005 AP003062.2-201ENST00000624288 1117 ntBASIC12.15□□□□□ -0.46
SLC1A1P43005 AC006511.4-201ENST00000631571 561 ntTSL 3 BASIC12.15□□□□□ -0.46
SLC1A1P43005 RCVRN-201ENST00000226193 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SLC1A1P43005 AL078459.1-201ENST00000427819 1950 ntTSL 2 BASIC12.15□□□□□ -0.46
SLC1A1P43005 PPP2R3C-201ENST00000261475 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SLC1A1P43005 GPR156-202ENST00000461057 2525 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SLC1A1P43005 ALK-207ENST00000642122 2513 ntBASIC12.15□□□□□ -0.46
SLC1A1P43005 MET-201ENST00000318493 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SLC1A1P43005 GMFB-201ENST00000358056 4301 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SLC1A1P43005 CUX1-202ENST00000292538 2930 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SLC1A1P43005 SPTBN2-211ENST00000617502 3498 ntTSL 5 BASIC12.15□□□□□ -0.46
SLC1A1P43005 PCDHGC4-203ENST00000617094 2793 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
SLC1A1P43005 HDLBP-203ENST00000391975 6372 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SLC1A1P43005 CHIC1-202ENST00000373504 6797 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SLC1A1P43005 NAA50-203ENST00000477813 1945 ntTSL 5 BASIC12.15□□□□□ -0.46
SLC1A1P43005 IGHMBP2-201ENST00000255078 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SLC1A1P43005 ZNF577-202ENST00000451628 1771 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
SLC1A1P43005 SLC26A8-208ENST00000490799 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
SLC1A1P43005 PPP3CB-203ENST00000394828 3119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
SLC1A1P43005 KCNE1B-203ENST00000622690 3149 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.47
SLC1A1P43005 MYO7A-203ENST00000409893 4050 ntTSL 5 BASIC12.15□□□□□ -0.47
SLC1A1P43005 PKP1-201ENST00000263946 5447 ntTSL 5 BASIC12.15□□□□□ -0.47
SLC1A1P43005 NRF1-205ENST00000393232 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
SLC1A1P43005 AL049829.3-201ENST00000604456 1875 ntBASIC12.14□□□□□ -0.47
SLC1A1P43005 FANCM-208ENST00000556036 2354 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SLC1A1P43005 ZSCAN2-207ENST00000448803 3813 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
SLC1A1P43005 LINC01166-201ENST00000443633 2619 ntTSL 2 BASIC12.14□□□□□ -0.47
SLC1A1P43005 PCGF2-207ENST00000620225 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SLC1A1P43005 DAB1-203ENST00000371231 1802 ntTSL 5 BASIC12.14□□□□□ -0.47
SLC1A1P43005 MBIP-211ENST00000621657 1809 ntTSL 5 BASIC12.14□□□□□ -0.47
SLC1A1P43005 PITX2-213ENST00000616641 3102 ntTSL 5 BASIC12.14□□□□□ -0.47
SLC1A1P43005 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
SLC1A1P43005 TIGD7-201ENST00000396862 3612 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
SLC1A1P43005 AL592490.1-201ENST00000409186 6347 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SLC1A1P43005 KBTBD12-201ENST00000343941 4121 ntTSL 2 BASIC12.14□□□□□ -0.47
SLC1A1P43005 CARD14-201ENST00000344227 4147 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SLC1A1P43005 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SLC1A1P43005 HMGCS1-202ENST00000433297 3466 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
SLC1A1P43005 TIMM10B-201ENST00000254616 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SLC1A1P43005 DCAF5-202ENST00000389997 2837 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SLC1A1P43005 TPM3-204ENST00000323144 1088 ntTSL 2 BASIC12.14□□□□□ -0.47
SLC1A1P43005 RN7SKP9-201ENST00000364923 299 ntBASIC12.14□□□□□ -0.47
SLC1A1P43005 KRT8P40-201ENST00000392131 563 ntBASIC12.14□□□□□ -0.47
SLC1A1P43005 DBI-204ENST00000409094 576 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SLC1A1P43005 MAPT-207ENST00000420682 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SLC1A1P43005 AL355472.3-201ENST00000425104 410 ntTSL 3 BASIC12.14□□□□□ -0.47
SLC1A1P43005 CD59-205ENST00000437761 758 ntAPPRIS P2 TSL 4 BASIC12.14□□□□□ -0.47
SLC1A1P43005 AL445933.2-201ENST00000440249 265 ntTSL 2 BASIC12.14□□□□□ -0.47
SLC1A1P43005 AC103563.2-201ENST00000442200 597 ntTSL 5 BASIC12.14□□□□□ -0.47
SLC1A1P43005 AC023157.1-201ENST00000453713 402 ntBASIC12.14□□□□□ -0.47
SLC1A1P43005 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC12.14□□□□□ -0.47
SLC1A1P43005 AC016924.1-202ENST00000512435 447 ntTSL 3 BASIC12.14□□□□□ -0.47
SLC1A1P43005 FP325317.1-201ENST00000539936 1042 ntBASIC12.14□□□□□ -0.47
SLC1A1P43005 AC092769.1-201ENST00000561101 355 ntTSL 3 BASIC12.14□□□□□ -0.47
SLC1A1P43005 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC12.14□□□□□ -0.47
SLC1A1P43005 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SLC1A1P43005 OSGIN1-206ENST00000565123 833 ntTSL 2 BASIC12.14□□□□□ -0.47
SLC1A1P43005 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SLC1A1P43005 AC007992.2-201ENST00000604771 835 ntBASIC12.14□□□□□ -0.47
SLC1A1P43005 Metazoa_SRP.79-201ENST00000610676 290 ntBASIC12.14□□□□□ -0.47
SLC1A1P43005 AC020658.5-201ENST00000622487 442 ntBASIC12.14□□□□□ -0.47
SLC1A1P43005 AC027281.2-201ENST00000623856 713 ntBASIC12.14□□□□□ -0.47
SLC1A1P43005 RHOXF1P3-202ENST00000639347 851 ntTSL 5 BASIC12.14□□□□□ -0.47
SLC1A1P43005 GRPEL2-201ENST00000329271 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SLC1A1P43005 ADCY1-201ENST00000297323 12503 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SLC1A1P43005 GRID2-201ENST00000282020 6117 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SLC1A1P43005 ATAT1-203ENST00000329992 2119 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
SLC1A1P43005 OPTC-201ENST00000367222 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SLC1A1P43005 ANKRD18CP-201ENST00000354752 2980 ntBASIC12.14□□□□□ -0.47
SLC1A1P43005 SRRT-215ENST00000614484 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SLC1A1P43005 SKA3-203ENST00000400018 2745 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
SLC1A1P43005 ZNF614-201ENST00000270649 4818 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SLC1A1P43005 ANAPC7-201ENST00000450008 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SLC1A1P43005 ALDH1L1-AS2-202ENST00000500525 2236 ntTSL 2 BASIC12.14□□□□□ -0.47
SLC1A1P43005 PNLIP-201ENST00000369221 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SLC1A1P43005 UNC45B-203ENST00000591048 2553 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SLC1A1P43005 ZNF433-203ENST00000419886 2322 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SLC1A1P43005 LINC00668-204ENST00000580197 2343 ntTSL 2 BASIC12.14□□□□□ -0.47
SLC1A1P43005 CR769775.4-201ENST00000638516 4139 ntBASIC12.13□□□□□ -0.47
SLC1A1P43005 MAPK10-203ENST00000361569 2434 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SLC1A1P43005 UHRF1-207ENST00000624301 3898 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SLC1A1P43005 PILRA-201ENST00000198536 1316 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
SLC1A1P43005 RNF165-201ENST00000269439 7596 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
SLC1A1P43005 SLC4A5-202ENST00000358683 3142 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SLC1A1P43005 AMIGO2-203ENST00000550413 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SLC1A1P43005 PADI4-201ENST00000375448 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 1136.6 ms