Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 WWC2-205ENST00000504005 5247 ntTSL 2 BASIC12.18□□□□□ -0.46
SLC1A1P43005 BAG6-237ENST00000375976 3644 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
SLC1A1P43005 SLC12A4-204ENST00000541864 3627 ntTSL 2 BASIC12.18□□□□□ -0.46
SLC1A1P43005 ADCYAP1R1-202ENST00000396211 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SLC1A1P43005 SULT1A1-211ENST00000569554 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SLC1A1P43005 CREB3L4-205ENST00000368607 1752 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
SLC1A1P43005 DEGS1-202ENST00000391877 1345 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
SLC1A1P43005 CD209-206ENST00000394173 1313 ntTSL 2 BASIC12.18□□□□□ -0.46
SLC1A1P43005 LGMNP1-201ENST00000441282 1300 ntBASIC12.18□□□□□ -0.46
SLC1A1P43005 SPATA3-AS1-201ENST00000414876 3508 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SLC1A1P43005 CNTN2-232ENST00000640428 4146 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
SLC1A1P43005 ZNF185-209ENST00000449285 4328 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
SLC1A1P43005 DCT-202ENST00000446125 2395 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SLC1A1P43005 C8B-206ENST00000543257 2382 ntTSL 2 BASIC12.18□□□□□ -0.46
SLC1A1P43005 GOSR2-219ENST00000638697 1705 ntTSL 5 BASIC12.18□□□□□ -0.46
SLC1A1P43005 CES2-202ENST00000417689 3868 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SLC1A1P43005 PHKA1-203ENST00000373542 6020 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
SLC1A1P43005 FBXO9-202ENST00000323557 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SLC1A1P43005 LINC01278-204ENST00000609143 2768 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SLC1A1P43005 RPL30-201ENST00000287038 543 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SLC1A1P43005 AC245297.1-201ENST00000313342 933 ntBASIC12.18□□□□□ -0.46
SLC1A1P43005 KRTAP4-8-201ENST00000318329 468 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
SLC1A1P43005 USF1-201ENST00000368019 998 ntTSL 5 BASIC12.18□□□□□ -0.46
SLC1A1P43005 DDR1-227ENST00000376570 3820 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
SLC1A1P43005 AL357373.1-201ENST00000394974 322 ntBASIC12.18□□□□□ -0.46
SLC1A1P43005 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC12.18□□□□□ -0.46
SLC1A1P43005 LYG2-203ENST00000409679 878 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SLC1A1P43005 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SLC1A1P43005 THRB-AS1-201ENST00000432368 1216 ntTSL 2 BASIC12.18□□□□□ -0.46
SLC1A1P43005 APOBEC3H-204ENST00000442487 988 ntAPPRIS P3 TSL 3 BASIC12.18□□□□□ -0.46
SLC1A1P43005 ZEB2-214ENST00000462355 656 ntTSL 4 BASIC12.18□□□□□ -0.46
SLC1A1P43005 HNRNPA1P24-201ENST00000476029 1046 ntBASIC12.18□□□□□ -0.46
SLC1A1P43005 CR545473.1-201ENST00000511554 277 ntBASIC12.18□□□□□ -0.46
SLC1A1P43005 LINC01194-203ENST00000513051 670 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SLC1A1P43005 PAX5-209ENST00000520154 1255 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SLC1A1P43005 MAP3K9-204ENST00000554146 2982 ntTSL 2 BASIC12.18□□□□□ -0.46
SLC1A1P43005 AL390726.4-201ENST00000566538 469 ntTSL 5 BASIC12.18□□□□□ -0.46
SLC1A1P43005 AC006581.2-201ENST00000631830 455 ntTSL 3 BASIC12.18□□□□□ -0.46
SLC1A1P43005 CACNG4-201ENST00000262138 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SLC1A1P43005 MIR100HG-212ENST00000531381 3370 ntTSL 2 BASIC12.18□□□□□ -0.46
SLC1A1P43005 UBL7-204ENST00000564488 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SLC1A1P43005 TROAP-201ENST00000257909 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
SLC1A1P43005 MEOX1-201ENST00000318579 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SLC1A1P43005 GRB10-210ENST00000407526 2279 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SLC1A1P43005 AC106788.1-201ENST00000550753 2661 ntTSL 2 BASIC12.18□□□□□ -0.46
SLC1A1P43005 ZC3H3-201ENST00000262577 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SLC1A1P43005 ILF3-202ENST00000407004 3671 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SLC1A1P43005 AL139220.2-207ENST00000434244 2644 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SLC1A1P43005 PTCH2-201ENST00000372192 4225 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
SLC1A1P43005 ST6GALNAC5-202ENST00000477717 3751 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SLC1A1P43005 DDR1-232ENST00000418800 3588 ntAPPRIS P3 TSL 2 BASIC12.18□□□□□ -0.46
SLC1A1P43005 RCBTB2-202ENST00000430805 3179 ntTSL 2 BASIC12.18□□□□□ -0.46
SLC1A1P43005 PIGO-201ENST00000298004 2588 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SLC1A1P43005 MICU1-201ENST00000361114 2383 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SLC1A1P43005 P4HA3-AS1-201ENST00000502071 2157 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SLC1A1P43005 NAA16-202ENST00000403412 1751 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SLC1A1P43005 LRRC41-207ENST00000617190 4128 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SLC1A1P43005 PHF8-201ENST00000322659 2921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SLC1A1P43005 RD3-201ENST00000367002 4266 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SLC1A1P43005 HKDC1-201ENST00000354624 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SLC1A1P43005 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC12.17□□□□□ -0.46
SLC1A1P43005 PLCD4-206ENST00000450993 3232 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SLC1A1P43005 RASGRP4-207ENST00000587738 2293 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
SLC1A1P43005 RC3H2-202ENST00000357244 3991 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
SLC1A1P43005 AC023449.2-201ENST00000620538 2400 ntBASIC12.17□□□□□ -0.46
SLC1A1P43005 BEST3-204ENST00000476098 1692 ntTSL 3 BASIC12.17□□□□□ -0.46
SLC1A1P43005 C4orf3-201ENST00000399075 2960 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
SLC1A1P43005 WRB-202ENST00000380708 1464 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SLC1A1P43005 SLC22A16-201ENST00000330550 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SLC1A1P43005 LINC01845-201ENST00000518418 2012 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SLC1A1P43005 ARHGEF4-201ENST00000326016 3666 ntAPPRIS P3 TSL 2 BASIC12.17□□□□□ -0.46
SLC1A1P43005 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SLC1A1P43005 SPATA22-201ENST00000268981 1280 ntTSL 2 BASIC12.17□□□□□ -0.46
SLC1A1P43005 DHDDS-203ENST00000374185 1148 ntTSL 2 BASIC12.17□□□□□ -0.46
SLC1A1P43005 TRGV4-201ENST00000390345 688 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
SLC1A1P43005 OAZ3-202ENST00000400999 890 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
SLC1A1P43005 DDTP1-201ENST00000443589 383 ntBASIC12.17□□□□□ -0.46
SLC1A1P43005 BX284656.1-201ENST00000446364 668 ntTSL 3 BASIC12.17□□□□□ -0.46
SLC1A1P43005 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC12.17□□□□□ -0.46
SLC1A1P43005 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC12.17□□□□□ -0.46
SLC1A1P43005 TPT1P6-201ENST00000458298 514 ntBASIC12.17□□□□□ -0.46
SLC1A1P43005 FPGT-205ENST00000482102 561 ntTSL 4 BASIC12.17□□□□□ -0.46
SLC1A1P43005 AC026412.1-206ENST00000502273 206 ntBASIC12.17□□□□□ -0.46
SLC1A1P43005 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC12.17□□□□□ -0.46
SLC1A1P43005 AL732372.3-201ENST00000514436 1239 ntBASIC12.17□□□□□ -0.46
SLC1A1P43005 AC245164.1-201ENST00000517731 412 ntTSL 3 BASIC12.17□□□□□ -0.46
SLC1A1P43005 AC026904.4-201ENST00000523038 559 ntTSL 4 BASIC12.17□□□□□ -0.46
SLC1A1P43005 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC12.17□□□□□ -0.46
SLC1A1P43005 DSCAS-201ENST00000581836 553 ntTSL 4 BASIC12.17□□□□□ -0.46
SLC1A1P43005 SMIM22-201ENST00000586005 366 ntAPPRIS P4 TSL 3 BASIC12.17□□□□□ -0.46
SLC1A1P43005 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC12.17□□□□□ -0.46
SLC1A1P43005 IFNL3P1-201ENST00000595082 501 ntBASIC12.17□□□□□ -0.46
SLC1A1P43005 AC008555.5-202ENST00000604749 570 ntTSL 4 BASIC12.17□□□□□ -0.46
SLC1A1P43005 AC130343.2-201ENST00000615078 426 ntBASIC12.17□□□□□ -0.46
SLC1A1P43005 AC007274.3-201ENST00000619838 385 ntBASIC12.17□□□□□ -0.46
SLC1A1P43005 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
SLC1A1P43005 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
SLC1A1P43005 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
SLC1A1P43005 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
SLC1A1P43005 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms