Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 EPHA6-201ENST00000389672 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SLC1A1P43005 OXGR1-204ENST00000543457 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SLC1A1P43005 SHANK2-201ENST00000338508 7271 ntTSL 5 BASIC12.2□□□□□ -0.46
SLC1A1P43005 ZSCAN22-201ENST00000329665 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SLC1A1P43005 SUPT7L-204ENST00000406540 2869 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SLC1A1P43005 SULT1A2-201ENST00000335715 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SLC1A1P43005 USMG5-202ENST00000337003 560 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SLC1A1P43005 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SLC1A1P43005 CAV2-202ENST00000343213 776 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SLC1A1P43005 SPANXD-201ENST00000370515 682 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SLC1A1P43005 IGLV3-22-201ENST00000390307 409 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
SLC1A1P43005 IGLV3-21-201ENST00000390308 602 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
SLC1A1P43005 IGLV8OR8-1-201ENST00000399730 352 ntBASIC12.2□□□□□ -0.46
SLC1A1P43005 OR13E1P-201ENST00000417104 922 ntBASIC12.2□□□□□ -0.46
SLC1A1P43005 TRERNA1-201ENST00000431460 462 ntTSL 2 BASIC12.2□□□□□ -0.46
SLC1A1P43005 CA5BP1-205ENST00000435806 1064 ntBASIC12.2□□□□□ -0.46
SLC1A1P43005 AC073370.1-201ENST00000441348 525 ntTSL 3 BASIC12.2□□□□□ -0.46
SLC1A1P43005 AC073188.5-201ENST00000451103 673 ntTSL 2 BASIC12.2□□□□□ -0.46
SLC1A1P43005 SURF6P1-201ENST00000451854 827 ntBASIC12.2□□□□□ -0.46
SLC1A1P43005 HOPX-209ENST00000508121 904 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
SLC1A1P43005 AC097658.2-201ENST00000512715 624 ntTSL 3 BASIC12.2□□□□□ -0.46
SLC1A1P43005 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC12.2□□□□□ -0.46
SLC1A1P43005 LY6E-215ENST00000523847 427 ntTSL 3 BASIC12.2□□□□□ -0.46
SLC1A1P43005 AKR1B1P3-201ENST00000525311 588 ntBASIC12.2□□□□□ -0.46
SLC1A1P43005 TTC39A-AS1-201ENST00000564479 812 ntTSL 3 BASIC12.2□□□□□ -0.46
SLC1A1P43005 DNM1P28-201ENST00000565702 474 ntBASIC12.2□□□□□ -0.46
SLC1A1P43005 MT1G-204ENST00000569500 305 ntTSL 3 BASIC12.2□□□□□ -0.46
SLC1A1P43005 SDHDP1-201ENST00000588055 474 ntBASIC12.2□□□□□ -0.46
SLC1A1P43005 AC098617.1-207ENST00000594591 810 ntTSL 5 BASIC12.2□□□□□ -0.46
SLC1A1P43005 ZNF548-209ENST00000598895 571 ntTSL 4 BASIC12.2□□□□□ -0.46
SLC1A1P43005 AC083841.4-201ENST00000637396 352 ntBASIC12.2□□□□□ -0.46
SLC1A1P43005 ARHGEF10-203ENST00000398560 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SLC1A1P43005 CTNNA2-219ENST00000629316 3167 ntTSL 2 BASIC12.2□□□□□ -0.46
SLC1A1P43005 CHAMP1-201ENST00000361283 3795 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SLC1A1P43005 MYOZ3-201ENST00000297130 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SLC1A1P43005 TENM3-204ENST00000511685 10896 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
SLC1A1P43005 SLC28A1-204ENST00000538177 2155 ntTSL 2 BASIC12.2□□□□□ -0.46
SLC1A1P43005 CISD1-201ENST00000333926 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SLC1A1P43005 HLCS-202ENST00000399120 6466 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SLC1A1P43005 ANKRD17-202ENST00000358602 10784 ntAPPRIS P4 TSL 5 BASIC12.2□□□□□ -0.46
SLC1A1P43005 GRK1-201ENST00000335678 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SLC1A1P43005 PCDHGB6-201ENST00000520790 4599 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
SLC1A1P43005 FNDC9-201ENST00000312349 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SLC1A1P43005 AC112200.2-201ENST00000624673 1739 ntBASIC12.2□□□□□ -0.46
SLC1A1P43005 TXNDC16-201ENST00000281741 4564 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SLC1A1P43005 UBL7-206ENST00000565335 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SLC1A1P43005 LAMA4-201ENST00000230538 6547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SLC1A1P43005 SCN5A-207ENST00000449557 5898 ntTSL 5 BASIC12.19□□□□□ -0.46
SLC1A1P43005 BMPR1B-208ENST00000515059 5567 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SLC1A1P43005 MICAL3-203ENST00000400561 3046 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SLC1A1P43005 PUM2-204ENST00000403432 3594 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
SLC1A1P43005 DDX6-202ENST00000526070 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SLC1A1P43005 RAB7B-202ENST00000617991 3014 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
SLC1A1P43005 MTHFR-204ENST00000376590 7094 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SLC1A1P43005 ZC4H2-202ENST00000374839 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SLC1A1P43005 RAB39B-201ENST00000369454 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SLC1A1P43005 CCDC144A-206ENST00000399273 8686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SLC1A1P43005 PTPN1-201ENST00000371621 4008 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SLC1A1P43005 AL008638.4-201ENST00000624792 1315 ntBASIC12.19□□□□□ -0.46
SLC1A1P43005 CLIC1-207ENST00000375780 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SLC1A1P43005 CR2-203ENST00000367059 3877 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SLC1A1P43005 REG1B-201ENST00000305089 767 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SLC1A1P43005 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
SLC1A1P43005 OR2A14-201ENST00000408899 1012 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
SLC1A1P43005 RPSAP46-201ENST00000428316 882 ntBASIC12.19□□□□□ -0.46
SLC1A1P43005 ADORA2BP1-201ENST00000429195 842 ntBASIC12.19□□□□□ -0.46
SLC1A1P43005 AL162595.1-201ENST00000429227 868 ntTSL 5 BASIC12.19□□□□□ -0.46
SLC1A1P43005 AC004870.4-202ENST00000433337 455 ntTSL 3 BASIC12.19□□□□□ -0.46
SLC1A1P43005 AC062028.2-201ENST00000437876 856 ntBASIC12.19□□□□□ -0.46
SLC1A1P43005 AC105446.1-201ENST00000441882 407 ntTSL 3 BASIC12.19□□□□□ -0.46
SLC1A1P43005 AC245517.1-201ENST00000444224 1262 ntBASIC12.19□□□□□ -0.46
SLC1A1P43005 Z69733.1-201ENST00000445990 632 ntTSL 3 BASIC12.19□□□□□ -0.46
SLC1A1P43005 AP000522.1-201ENST00000448070 121 ntBASIC12.19□□□□□ -0.46
SLC1A1P43005 SLC25A15P1-201ENST00000456738 342 ntBASIC12.19□□□□□ -0.46
SLC1A1P43005 RN7SL33P-201ENST00000462543 342 ntBASIC12.19□□□□□ -0.46
SLC1A1P43005 OR2A15P-201ENST00000463814 900 ntBASIC12.19□□□□□ -0.46
SLC1A1P43005 AC108082.1-201ENST00000510857 331 ntBASIC12.19□□□□□ -0.46
SLC1A1P43005 KBTBD11-OT1-201ENST00000518539 815 ntTSL 3 BASIC12.19□□□□□ -0.46
SLC1A1P43005 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC12.19□□□□□ -0.46
SLC1A1P43005 AC008735.4-201ENST00000614815 608 ntBASIC12.19□□□□□ -0.46
SLC1A1P43005 AC005609.5-202ENST00000624176 513 ntTSL 4 BASIC12.19□□□□□ -0.46
SLC1A1P43005 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SLC1A1P43005 GPR176-202ENST00000543580 1755 ntTSL 2 BASIC12.19□□□□□ -0.46
SLC1A1P43005 MAP3K7CL-207ENST00000399934 1964 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
SLC1A1P43005 AC104852.1-201ENST00000518921 1459 ntBASIC12.19□□□□□ -0.46
SLC1A1P43005 BCOR-202ENST00000378444 6358 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SLC1A1P43005 HEXA-AS1-201ENST00000567598 2676 ntBASIC12.19□□□□□ -0.46
SLC1A1P43005 KIAA0513-206ENST00000566428 7772 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SLC1A1P43005 GOLGA4-201ENST00000356847 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SLC1A1P43005 NOD1-201ENST00000222823 4499 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SLC1A1P43005 NRP1-201ENST00000265371 5882 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
SLC1A1P43005 GABBR1-201ENST00000355973 3506 ntTSL 2 BASIC12.19□□□□□ -0.46
SLC1A1P43005 ZNF691-204ENST00000372506 1859 ntAPPRIS P3 TSL 2 BASIC12.19□□□□□ -0.46
SLC1A1P43005 TRAF3IP3-205ENST00000400959 1854 ntTSL 5 BASIC12.19□□□□□ -0.46
SLC1A1P43005 AC131254.1-201ENST00000507496 1867 ntTSL 2 BASIC12.19□□□□□ -0.46
SLC1A1P43005 ASPH-201ENST00000356457 3730 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SLC1A1P43005 UBE2L3-202ENST00000458578 3007 ntTSL 2 BASIC12.19□□□□□ -0.46
SLC1A1P43005 SLC16A6-205ENST00000620436 2055 ntTSL 5 BASIC12.18□□□□□ -0.46
SLC1A1P43005 SPATA18-201ENST00000295213 4396 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SLC1A1P43005 PTCH1-209ENST00000437951 8049 ntTSL 5 BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms