Protein–RNA interactions for Protein: O75533

SF3B1, Splicing factor 3B subunit 1, humanhuman

Known RBP eCLIP

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1O75533 FAM193B-216ENST00000513502 705 ntTSL 220.63■□□□□ 0.891e-8■■■■■ 30.6
SF3B1O75533 FAM193B-205ENST00000506064 399 ntTSL 318.71■□□□□ 0.591e-8■■■■■ 30.6
SF3B1O75533 NSFL1C-208ENST00000487086 456 ntTSL 218.13■□□□□ 0.491e-8■■■■■ 30.6
SF3B1O75533 EIF2AK1-206ENST00000463213 791 ntTSL 217.98■□□□□ 0.471e-8■■■■■ 30.6
SF3B1O75533 MOB1B-203ENST00000502869 760 ntTSL 317.72■□□□□ 0.432e-9■■■■■ 30.6
SF3B1O75533 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC13.04□□□□□ -0.321e-8■■■■■ 30.6
SF3B1O75533 MOB1B-204ENST00000509041 2056 ntTSL 212.8□□□□□ -0.362e-9■■■■■ 30.6
SF3B1O75533 ARPP19-203ENST00000561971 799 ntTSL 3 BASIC10.38□□□□□ -0.751e-8■■■■■ 30.6
SF3B1O75533 ARPP19-212ENST00000569281 661 ntAPPRIS P1 TSL 4 BASIC10.38□□□□□ -0.751e-8■■■■■ 30.6
SF3B1O75533 ARPP19-209ENST00000567669 745 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.891e-8■■■■■ 30.6
SF3B1O75533 ARPP19-213ENST00000569723 550 ntTSL 4 BASIC9.48□□□□□ -0.891e-8■■■■■ 30.6
SF3B1O75533 AC005363.1-201ENST00000530779 351 ntBASIC6.99□□□□□ -1.291e-8■■■■■ 30.6
SF3B1O75533 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.14□□□□□ -1.431e-8■■■■■ 30.6
SF3B1O75533 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.491e-8■■■■■ 30.6
SF3B1O75533 SYNJ1-208ENST00000456084 583 ntTSL 25.53□□□□□ -1.521e-8■■■■■ 30.6
SF3B1O75533 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.28□□□□□ -1.561e-8■■■■■ 30.6
SF3B1O75533 BMP2K-206ENST00000507670 1170 ntTSL 1 (best)4.01□□□□□ -1.771e-8■■■■■ 30.6
SF3B1O75533 ARPP19-210ENST00000567830 275 ntTSL 31.97□□□□□ -2.091e-8■■■■■ 30.6
SF3B1O75533 DAZAP1-210ENST00000592453 1021 ntTSL 515.68■□□□□ 0.12e-6■■■■■ 30.6
SF3B1O75533 RSRC2-215ENST00000528263 792 ntTSL 36.99□□□□□ -1.292e-6■■■■■ 30.5
SF3B1O75533 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.35■□□□□ 0.532e-7■■■■■ 30.5
SF3B1O75533 XPO1-205ENST00000422552 382 ntTSL 55.56□□□□□ -1.522e-7■■■■■ 30.5
SF3B1O75533 XPO1-204ENST00000420673 682 ntTSL 23.81□□□□□ -1.82e-7■■■■■ 30.5
SF3B1O75533 XPO1-218ENST00000476585 342 ntTSL 23.03□□□□□ -1.922e-7■■■■■ 30.5
SF3B1O75533 XPO1-215ENST00000468259 600 ntTSL 52.16□□□□□ -2.062e-7■■■■■ 30.5
SF3B1O75533 ATP1A1-204ENST00000418797 654 ntTSL 321.96■■□□□ 1.115e-6■■■■■ 30.5
SF3B1O75533 ATP1A1-208ENST00000488733 1728 ntTSL 220.95■□□□□ 0.945e-6■■■■■ 30.5
SF3B1O75533 EIF4A2-208ENST00000445596 600 ntTSL 214.12□□□□□ -0.156e-7■■■■■ 30.4
SF3B1O75533 EIF4A2-215ENST00000467585 570 ntTSL 214.05□□□□□ -0.166e-7■■■■■ 30.4
SF3B1O75533 EIF4A2-227ENST00000498746 579 ntTSL 211.94□□□□□ -0.56e-7■■■■■ 30.4
SF3B1O75533 EIF4A2-211ENST00000465222 676 ntTSL 26.99□□□□□ -1.296e-7■■■■■ 30.4
SF3B1O75533 EIF4A2-210ENST00000465032 578 ntTSL 26.82□□□□□ -1.326e-7■■■■■ 30.4
SF3B1O75533 EIF4A2-212ENST00000465267 1054 ntTSL 26.82□□□□□ -1.326e-7■■■■■ 30.4
SF3B1O75533 EIF4A2-224ENST00000495049 576 ntTSL 26.82□□□□□ -1.326e-7■■■■■ 30.4
SF3B1O75533 EIF4A2-221ENST00000491473 579 ntTSL 26.29□□□□□ -1.46e-7■■■■■ 30.4
SF3B1O75533 EIF4A2-220ENST00000486805 590 ntTSL 23.52□□□□□ -1.856e-7■■■■■ 30.4
SF3B1O75533 GSE1-205ENST00000412692 6625 ntTSL 515.52■□□□□ 0.082e-6■■■■■ 30.4
SF3B1O75533 PUM1-211ENST00000498419 3068 ntTSL 56.9□□□□□ -1.39e-7■■■■■ 30.4
SF3B1O75533 MTX2-204ENST00000443241 799 ntTSL 3 BASIC26.01■■□□□ 1.752e-6■■■■■ 30.3
SF3B1O75533 MTX2-205ENST00000452865 817 ntTSL 326.01■■□□□ 1.752e-6■■■■■ 30.3
SF3B1O75533 MTX2-203ENST00000423461 618 ntTSL 325.54■■□□□ 1.682e-6■■■■■ 30.3
SF3B1O75533 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.372e-6■■■■■ 30.3
SF3B1O75533 MTX2-202ENST00000420864 1592 ntTSL 1 (best)23.6■■□□□ 1.372e-6■■■■■ 30.3
SF3B1O75533 AFDN-209ENST00000400825 963 ntTSL 531.39■■■□□ 2.622e-6■■■■■ 30.3
SF3B1O75533 AFDN-208ENST00000400824 875 ntTSL 529.14■■■□□ 2.252e-6■■■■■ 30.3
SF3B1O75533 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.43e-6■■■■■ 30.3
SF3B1O75533 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.213e-6■■■■■ 30.3
SF3B1O75533 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC7.81□□□□□ -1.161e-6■■■■■ 30.3
SF3B1O75533 LARP1-206ENST00000518677 827 ntTSL 512.01□□□□□ -0.492e-14■■■■■ 30.3
SF3B1O75533 LARP1-212ENST00000522272 467 ntTSL 38.06□□□□□ -1.122e-14■■■■■ 30.3
SF3B1O75533 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.042e-7■■■■■ 30.3
SF3B1O75533 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.052e-7■■■■■ 30.3
SF3B1O75533 TMBIM6-227ENST00000552699 2964 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.332e-7■■■■■ 30.3
SF3B1O75533 TMBIM6-201ENST00000267115 2836 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.862e-7■■■■■ 30.3
SF3B1O75533 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC7.85□□□□□ -1.152e-7■■■■■ 30.3
SF3B1O75533 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.282e-7■■■■■ 30.3
SF3B1O75533 NCL-202ENST00000356936 890 ntTSL 318.81■□□□□ 0.63e-10■■■■■ 30.3
SF3B1O75533 NCL-207ENST00000461347 3967 ntTSL 214.57□□□□□ -0.083e-10■■■■■ 30.3
SF3B1O75533 NCL-201ENST00000322723 4034 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.413e-10■■■■■ 30.3
SF3B1O75533 NCL-210ENST00000494618 910 ntTSL 22.88□□□□□ -1.953e-10■■■■■ 30.3
SF3B1O75533 PDCD6IP-206ENST00000457054 5962 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.53e-8■■■■■ 30.2
SF3B1O75533 PDCD6IP-201ENST00000307296 6161 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.943e-8■■■■■ 30.2
SF3B1O75533 SLC3A2-217ENST00000541425 595 ntTSL 511.88□□□□□ -0.514e-7■■■■■ 30.2
SF3B1O75533 PCBP2-210ENST00000547859 1919 ntTSL 210.94□□□□□ -0.661e-6■■■■■ 30.2
SF3B1O75533 PCBP2-214ENST00000549272 445 ntTSL 22.85□□□□□ -1.951e-6■■■■■ 30.2
SF3B1O75533 RPS2-204ENST00000526908 638 ntTSL 222.44■■□□□ 1.183e-6■■■■■ 30.2
SF3B1O75533 RPS2-216ENST00000534461 734 ntTSL 220.1■□□□□ 0.813e-6■■■■■ 30.2
SF3B1O75533 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC31.15■■■□□ 2.587e-8■■■■■ 30.2
SF3B1O75533 SLC2A4RG-204ENST00000482718 541 ntTSL 229.02■■■□□ 2.247e-8■■■■■ 30.2
SF3B1O75533 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.227e-8■■■■■ 30.2
SF3B1O75533 SLC2A4RG-205ENST00000485897 518 ntTSL 524.55■■□□□ 1.527e-8■■■■■ 30.2
SF3B1O75533 KLF6-202ENST00000380946 744 ntTSL 223.33■■□□□ 1.337e-8■■■■■ 30.2
SF3B1O75533 TMC6-213ENST00000589933 580 ntTSL 323.29■■□□□ 1.326e-7■■■■■ 30.2
SF3B1O75533 SLC2A4RG-207ENST00000493772 1328 ntTSL 1 (best)21.91■■□□□ 1.17e-8■■■■■ 30.2
SF3B1O75533 NOL3-206ENST00000564992 677 ntAPPRIS ALT2 TSL 221.78■■□□□ 1.087e-8■■■■■ 30.2
SF3B1O75533 NOL3-203ENST00000563439 642 ntAPPRIS ALT2 TSL 321.49■■□□□ 1.037e-8■■■■■ 30.2
SF3B1O75533 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.977e-8■■■■■ 30.2
SF3B1O75533 COPS6-210ENST00000496358 610 ntTSL 220.01■□□□□ 0.797e-8■■■■■ 30.2
SF3B1O75533 NOL3-208ENST00000565645 519 ntTSL 419.81■□□□□ 0.767e-8■■■■■ 30.2
SF3B1O75533 COPS6-206ENST00000468499 745 ntTSL 319.66■□□□□ 0.747e-8■■■■■ 30.2
SF3B1O75533 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.46■□□□□ 0.717e-8■■■■■ 30.2
SF3B1O75533 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.687e-8■■■■■ 30.2
SF3B1O75533 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.31■□□□□ 0.687e-8■■■■■ 30.2
SF3B1O75533 NOL3-207ENST00000565560 579 ntAPPRIS ALT2 TSL 319.17■□□□□ 0.667e-8■■■■■ 30.2
SF3B1O75533 SLC2A4RG-202ENST00000473157 991 ntTSL 319.13■□□□□ 0.657e-8■■■■■ 30.2
SF3B1O75533 KLHDC4-225ENST00000569487 2072 ntTSL 219.03■□□□□ 0.647e-8■■■■■ 30.2
SF3B1O75533 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.477e-8■■■■■ 30.2
SF3B1O75533 LAMP1-203ENST00000472564 5242 ntTSL 217.21■□□□□ 0.357e-8■■■■■ 30.2
SF3B1O75533 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.317e-8■■■■■ 30.2
SF3B1O75533 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.227e-8■■■■■ 30.2
SF3B1O75533 EIF3B-210ENST00000468611 1868 ntTSL 216.16■□□□□ 0.187e-8■■■■■ 30.2
SF3B1O75533 KLHDC4-223ENST00000568499 445 ntTSL 316.06■□□□□ 0.167e-8■■■■■ 30.2
SF3B1O75533 PRCC-202ENST00000454659 1084 ntTSL 315.5■□□□□ 0.077e-8■■■■■ 30.2
SF3B1O75533 RANBP1-209ENST00000432879 744 ntTSL 315.49■□□□□ 0.075e-6■■■■■ 30.2
SF3B1O75533 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.031e-6■■■■■ 30.2
SF3B1O75533 SLC2A4RG-206ENST00000491109 637 ntTSL 215.22■□□□□ 0.037e-8■■■■■ 30.2
SF3B1O75533 EIF3B-207ENST00000465670 2766 ntTSL 215.03■□□□□ -07e-8■■■■■ 30.2
SF3B1O75533 PRCC-206ENST00000491853 833 ntTSL 313.88□□□□□ -0.197e-8■■■■■ 30.2
SF3B1O75533 ORC6-204ENST00000566860 1699 ntTSL 2 BASIC13.51□□□□□ -0.251e-6■■■■■ 30.2
SF3B1O75533 KLF6-206ENST00000497571 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.267e-8■■■■■ 30.2
Retrieved 100 of 46,956 protein–RNA pairs in 4166.2 ms