Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC26.38■■□□□ 1.81
TNFRSF11AQ9Y6Q6 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC26.38■■□□□ 1.81
TNFRSF11AQ9Y6Q6 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC26.38■■□□□ 1.81
TNFRSF11AQ9Y6Q6 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
TNFRSF11AQ9Y6Q6 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
TNFRSF11AQ9Y6Q6 AC242852.2-201ENST00000615738 1807 ntBASIC26.37■■□□□ 1.81
TNFRSF11AQ9Y6Q6 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TNFRSF11AQ9Y6Q6 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC26.37■■□□□ 1.81
TNFRSF11AQ9Y6Q6 COX20-201ENST00000366528 568 ntTSL 2 BASIC26.37■■□□□ 1.81
TNFRSF11AQ9Y6Q6 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC26.37■■□□□ 1.81
TNFRSF11AQ9Y6Q6 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
TNFRSF11AQ9Y6Q6 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TNFRSF11AQ9Y6Q6 AC012676.1-201ENST00000574705 1949 ntBASIC26.37■■□□□ 1.81
TNFRSF11AQ9Y6Q6 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC26.37■■□□□ 1.81
TNFRSF11AQ9Y6Q6 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
TNFRSF11AQ9Y6Q6 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TNFRSF11AQ9Y6Q6 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TNFRSF11AQ9Y6Q6 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC26.36■■□□□ 1.81
TNFRSF11AQ9Y6Q6 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC26.36■■□□□ 1.81
TNFRSF11AQ9Y6Q6 PARL-206ENST00000435888 1098 ntTSL 5 BASIC26.36■■□□□ 1.81
TNFRSF11AQ9Y6Q6 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TNFRSF11AQ9Y6Q6 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TNFRSF11AQ9Y6Q6 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
TNFRSF11AQ9Y6Q6 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
TNFRSF11AQ9Y6Q6 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC26.36■■□□□ 1.81
TNFRSF11AQ9Y6Q6 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC26.36■■□□□ 1.81
TNFRSF11AQ9Y6Q6 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
TNFRSF11AQ9Y6Q6 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
TNFRSF11AQ9Y6Q6 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC26.35■■□□□ 1.81
TNFRSF11AQ9Y6Q6 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC26.34■■□□□ 1.81
TNFRSF11AQ9Y6Q6 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TNFRSF11AQ9Y6Q6 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC26.34■■□□□ 1.81
TNFRSF11AQ9Y6Q6 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TNFRSF11AQ9Y6Q6 AC079140.4-201ENST00000507448 529 ntBASIC26.34■■□□□ 1.81
TNFRSF11AQ9Y6Q6 FAM99A-202ENST00000538190 1989 ntBASIC26.34■■□□□ 1.81
TNFRSF11AQ9Y6Q6 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TNFRSF11AQ9Y6Q6 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TNFRSF11AQ9Y6Q6 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC26.34■■□□□ 1.81
TNFRSF11AQ9Y6Q6 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
TNFRSF11AQ9Y6Q6 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC26.34■■□□□ 1.81
TNFRSF11AQ9Y6Q6 ECEL1P1-201ENST00000373592 1742 ntBASIC26.34■■□□□ 1.81
TNFRSF11AQ9Y6Q6 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
TNFRSF11AQ9Y6Q6 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TNFRSF11AQ9Y6Q6 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
TNFRSF11AQ9Y6Q6 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC26.33■■□□□ 1.81
TNFRSF11AQ9Y6Q6 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC26.33■■□□□ 1.81
TNFRSF11AQ9Y6Q6 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC26.33■■□□□ 1.81
TNFRSF11AQ9Y6Q6 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC26.33■■□□□ 1.81
TNFRSF11AQ9Y6Q6 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC26.33■■□□□ 1.81
TNFRSF11AQ9Y6Q6 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC26.33■■□□□ 1.81
TNFRSF11AQ9Y6Q6 AC010542.4-201ENST00000563151 1910 ntBASIC26.33■■□□□ 1.81
TNFRSF11AQ9Y6Q6 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
TNFRSF11AQ9Y6Q6 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
TNFRSF11AQ9Y6Q6 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
TNFRSF11AQ9Y6Q6 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TNFRSF11AQ9Y6Q6 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
TNFRSF11AQ9Y6Q6 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
TNFRSF11AQ9Y6Q6 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC26.32■■□□□ 1.8
TNFRSF11AQ9Y6Q6 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC26.32■■□□□ 1.8
TNFRSF11AQ9Y6Q6 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC26.32■■□□□ 1.8
TNFRSF11AQ9Y6Q6 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC26.32■■□□□ 1.8
TNFRSF11AQ9Y6Q6 GALNS-213ENST00000569433 723 ntTSL 3 BASIC26.32■■□□□ 1.8
TNFRSF11AQ9Y6Q6 AC003102.1-202ENST00000563394 1796 ntBASIC26.32■■□□□ 1.8
TNFRSF11AQ9Y6Q6 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TNFRSF11AQ9Y6Q6 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
TNFRSF11AQ9Y6Q6 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
TNFRSF11AQ9Y6Q6 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TNFRSF11AQ9Y6Q6 MYB-221ENST00000527615 2381 ntTSL 5 BASIC26.32■■□□□ 1.8
TNFRSF11AQ9Y6Q6 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
TNFRSF11AQ9Y6Q6 ME2-206ENST00000638410 2289 ntTSL 5 BASIC26.31■■□□□ 1.8
TNFRSF11AQ9Y6Q6 ME2-210ENST00000639255 2262 ntTSL 5 BASIC26.31■■□□□ 1.8
TNFRSF11AQ9Y6Q6 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
TNFRSF11AQ9Y6Q6 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TNFRSF11AQ9Y6Q6 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TNFRSF11AQ9Y6Q6 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TNFRSF11AQ9Y6Q6 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC26.31■■□□□ 1.8
TNFRSF11AQ9Y6Q6 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TNFRSF11AQ9Y6Q6 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TNFRSF11AQ9Y6Q6 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TNFRSF11AQ9Y6Q6 AL117328.2-201ENST00000624617 1940 ntBASIC26.31■■□□□ 1.8
TNFRSF11AQ9Y6Q6 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC26.31■■□□□ 1.8
TNFRSF11AQ9Y6Q6 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
TNFRSF11AQ9Y6Q6 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TNFRSF11AQ9Y6Q6 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TNFRSF11AQ9Y6Q6 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC26.3■■□□□ 1.8
TNFRSF11AQ9Y6Q6 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TNFRSF11AQ9Y6Q6 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TNFRSF11AQ9Y6Q6 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TNFRSF11AQ9Y6Q6 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TNFRSF11AQ9Y6Q6 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC26.3■■□□□ 1.8
TNFRSF11AQ9Y6Q6 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC26.3■■□□□ 1.8
TNFRSF11AQ9Y6Q6 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC26.3■■□□□ 1.8
TNFRSF11AQ9Y6Q6 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TNFRSF11AQ9Y6Q6 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC26.3■■□□□ 1.8
TNFRSF11AQ9Y6Q6 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC26.3■■□□□ 1.8
TNFRSF11AQ9Y6Q6 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TNFRSF11AQ9Y6Q6 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TNFRSF11AQ9Y6Q6 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC26.29■■□□□ 1.8
TNFRSF11AQ9Y6Q6 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TNFRSF11AQ9Y6Q6 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC26.29■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms