Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.43■□□□□ 0.86
AP4B1Q9Y6B7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
AP4B1Q9Y6B7 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.43■□□□□ 0.86
AP4B1Q9Y6B7 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
AP4B1Q9Y6B7 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
AP4B1Q9Y6B7 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
AP4B1Q9Y6B7 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
AP4B1Q9Y6B7 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
AP4B1Q9Y6B7 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
AP4B1Q9Y6B7 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
AP4B1Q9Y6B7 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
AP4B1Q9Y6B7 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
AP4B1Q9Y6B7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.42■□□□□ 0.86
AP4B1Q9Y6B7 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
AP4B1Q9Y6B7 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
AP4B1Q9Y6B7 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.42■□□□□ 0.86
AP4B1Q9Y6B7 AL391422.3-201ENST00000603791 2761 ntBASIC20.42■□□□□ 0.86
AP4B1Q9Y6B7 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
AP4B1Q9Y6B7 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
AP4B1Q9Y6B7 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
AP4B1Q9Y6B7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
AP4B1Q9Y6B7 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
AP4B1Q9Y6B7 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
AP4B1Q9Y6B7 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.42■□□□□ 0.86
AP4B1Q9Y6B7 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
AP4B1Q9Y6B7 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
AP4B1Q9Y6B7 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
AP4B1Q9Y6B7 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
AP4B1Q9Y6B7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
AP4B1Q9Y6B7 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
AP4B1Q9Y6B7 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
AP4B1Q9Y6B7 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
AP4B1Q9Y6B7 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
AP4B1Q9Y6B7 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
AP4B1Q9Y6B7 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
AP4B1Q9Y6B7 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
AP4B1Q9Y6B7 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
AP4B1Q9Y6B7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.41■□□□□ 0.86
AP4B1Q9Y6B7 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
AP4B1Q9Y6B7 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
AP4B1Q9Y6B7 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
AP4B1Q9Y6B7 AL136116.3-201ENST00000402907 1138 ntBASIC20.41■□□□□ 0.86
AP4B1Q9Y6B7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.41■□□□□ 0.86
AP4B1Q9Y6B7 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
AP4B1Q9Y6B7 MIR4466-201ENST00000606121 54 ntBASIC20.41■□□□□ 0.86
AP4B1Q9Y6B7 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
AP4B1Q9Y6B7 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.41■□□□□ 0.86
AP4B1Q9Y6B7 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
AP4B1Q9Y6B7 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.41■□□□□ 0.86
AP4B1Q9Y6B7 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.41■□□□□ 0.86
AP4B1Q9Y6B7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.41■□□□□ 0.86
AP4B1Q9Y6B7 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
AP4B1Q9Y6B7 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
AP4B1Q9Y6B7 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
AP4B1Q9Y6B7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.4■□□□□ 0.86
AP4B1Q9Y6B7 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
AP4B1Q9Y6B7 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.4■□□□□ 0.86
AP4B1Q9Y6B7 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
AP4B1Q9Y6B7 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.4■□□□□ 0.86
AP4B1Q9Y6B7 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
AP4B1Q9Y6B7 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.4■□□□□ 0.86
AP4B1Q9Y6B7 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
AP4B1Q9Y6B7 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
AP4B1Q9Y6B7 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
AP4B1Q9Y6B7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.39■□□□□ 0.86
AP4B1Q9Y6B7 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
AP4B1Q9Y6B7 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
AP4B1Q9Y6B7 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
AP4B1Q9Y6B7 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
AP4B1Q9Y6B7 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
AP4B1Q9Y6B7 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
AP4B1Q9Y6B7 Z98882.1-201ENST00000622160 2253 ntBASIC20.39■□□□□ 0.85
AP4B1Q9Y6B7 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
AP4B1Q9Y6B7 FEM1AP4-201ENST00000443167 1987 ntBASIC20.39■□□□□ 0.85
AP4B1Q9Y6B7 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
AP4B1Q9Y6B7 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
AP4B1Q9Y6B7 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
AP4B1Q9Y6B7 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
AP4B1Q9Y6B7 AC009102.2-201ENST00000606772 1639 ntBASIC20.38■□□□□ 0.85
AP4B1Q9Y6B7 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AP4B1Q9Y6B7 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
AP4B1Q9Y6B7 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.38■□□□□ 0.85
AP4B1Q9Y6B7 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AP4B1Q9Y6B7 SRD5A1P1-201ENST00000442297 786 ntBASIC20.38■□□□□ 0.85
AP4B1Q9Y6B7 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
AP4B1Q9Y6B7 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.38■□□□□ 0.85
AP4B1Q9Y6B7 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AP4B1Q9Y6B7 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AP4B1Q9Y6B7 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AP4B1Q9Y6B7 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AP4B1Q9Y6B7 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AP4B1Q9Y6B7 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
AP4B1Q9Y6B7 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.37■□□□□ 0.85
AP4B1Q9Y6B7 LINC01006-201ENST00000333319 2292 ntBASIC20.37■□□□□ 0.85
AP4B1Q9Y6B7 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.37■□□□□ 0.85
AP4B1Q9Y6B7 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
AP4B1Q9Y6B7 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
AP4B1Q9Y6B7 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
AP4B1Q9Y6B7 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
AP4B1Q9Y6B7 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms