Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC24.47■■□□□ 1.51
CLIC4Q9Y696 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC24.47■■□□□ 1.51
CLIC4Q9Y696 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
CLIC4Q9Y696 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
CLIC4Q9Y696 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CLIC4Q9Y696 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC24.46■■□□□ 1.51
CLIC4Q9Y696 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CLIC4Q9Y696 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
CLIC4Q9Y696 BX842568.3-201ENST00000418104 571 ntBASIC24.46■■□□□ 1.51
CLIC4Q9Y696 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CLIC4Q9Y696 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC24.46■■□□□ 1.51
CLIC4Q9Y696 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC24.46■■□□□ 1.51
CLIC4Q9Y696 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC24.45■■□□□ 1.51
CLIC4Q9Y696 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
CLIC4Q9Y696 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
CLIC4Q9Y696 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
CLIC4Q9Y696 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC24.45■■□□□ 1.5
CLIC4Q9Y696 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CLIC4Q9Y696 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC24.44■■□□□ 1.5
CLIC4Q9Y696 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC24.44■■□□□ 1.5
CLIC4Q9Y696 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CLIC4Q9Y696 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
CLIC4Q9Y696 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CLIC4Q9Y696 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CLIC4Q9Y696 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC24.44■■□□□ 1.5
CLIC4Q9Y696 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CLIC4Q9Y696 AC133561.4-201ENST00000566112 224 ntBASIC24.44■■□□□ 1.5
CLIC4Q9Y696 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CLIC4Q9Y696 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC24.44■■□□□ 1.5
CLIC4Q9Y696 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
CLIC4Q9Y696 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CLIC4Q9Y696 MFF-203ENST00000349901 1716 ntTSL 2 BASIC24.44■■□□□ 1.5
CLIC4Q9Y696 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CLIC4Q9Y696 FEM1AP4-201ENST00000443167 1987 ntBASIC24.43■■□□□ 1.5
CLIC4Q9Y696 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CLIC4Q9Y696 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CLIC4Q9Y696 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CLIC4Q9Y696 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC24.43■■□□□ 1.5
CLIC4Q9Y696 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CLIC4Q9Y696 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
CLIC4Q9Y696 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC24.43■■□□□ 1.5
CLIC4Q9Y696 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CLIC4Q9Y696 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CLIC4Q9Y696 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CLIC4Q9Y696 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC24.42■■□□□ 1.5
CLIC4Q9Y696 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CLIC4Q9Y696 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CLIC4Q9Y696 AC003102.1-202ENST00000563394 1796 ntBASIC24.42■■□□□ 1.5
CLIC4Q9Y696 AC135279.3-201ENST00000610945 1311 ntBASIC24.42■■□□□ 1.5
CLIC4Q9Y696 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC24.42■■□□□ 1.5
CLIC4Q9Y696 AC233992.3-201ENST00000607491 485 ntBASIC24.42■■□□□ 1.5
CLIC4Q9Y696 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
CLIC4Q9Y696 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CLIC4Q9Y696 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CLIC4Q9Y696 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CLIC4Q9Y696 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CLIC4Q9Y696 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
CLIC4Q9Y696 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC24.41■■□□□ 1.5
CLIC4Q9Y696 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CLIC4Q9Y696 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CLIC4Q9Y696 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
CLIC4Q9Y696 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
CLIC4Q9Y696 PEMT-206ENST00000435340 960 ntTSL 5 BASIC24.41■■□□□ 1.5
CLIC4Q9Y696 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CLIC4Q9Y696 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC24.41■■□□□ 1.5
CLIC4Q9Y696 AC104564.3-201ENST00000582367 638 ntBASIC24.41■■□□□ 1.5
CLIC4Q9Y696 SMUG1P1-201ENST00000590640 811 ntBASIC24.41■■□□□ 1.5
CLIC4Q9Y696 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CLIC4Q9Y696 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
CLIC4Q9Y696 AC008406.3-201ENST00000620001 1374 ntBASIC24.41■■□□□ 1.5
CLIC4Q9Y696 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CLIC4Q9Y696 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC24.4■■□□□ 1.5
CLIC4Q9Y696 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CLIC4Q9Y696 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
CLIC4Q9Y696 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CLIC4Q9Y696 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC24.4■■□□□ 1.5
CLIC4Q9Y696 AC096631.2-201ENST00000436136 790 ntBASIC24.4■■□□□ 1.5
CLIC4Q9Y696 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC24.4■■□□□ 1.5
CLIC4Q9Y696 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CLIC4Q9Y696 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
CLIC4Q9Y696 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CLIC4Q9Y696 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
CLIC4Q9Y696 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CLIC4Q9Y696 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CLIC4Q9Y696 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CLIC4Q9Y696 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CLIC4Q9Y696 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC24.39■■□□□ 1.5
CLIC4Q9Y696 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC24.39■■□□□ 1.5
CLIC4Q9Y696 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CLIC4Q9Y696 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CLIC4Q9Y696 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC24.39■■□□□ 1.49
CLIC4Q9Y696 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
CLIC4Q9Y696 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC24.39■■□□□ 1.49
CLIC4Q9Y696 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CLIC4Q9Y696 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC24.39■■□□□ 1.49
CLIC4Q9Y696 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC24.39■■□□□ 1.49
CLIC4Q9Y696 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC24.39■■□□□ 1.49
CLIC4Q9Y696 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
CLIC4Q9Y696 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CLIC4Q9Y696 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC24.38■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms