Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.19■□□□□ 0.82
AP4S1Q9Y587 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP4S1Q9Y587 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
AP4S1Q9Y587 AC104564.3-201ENST00000582367 638 ntBASIC20.19■□□□□ 0.82
AP4S1Q9Y587 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP4S1Q9Y587 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
AP4S1Q9Y587 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
AP4S1Q9Y587 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP4S1Q9Y587 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
AP4S1Q9Y587 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP4S1Q9Y587 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.19■□□□□ 0.82
AP4S1Q9Y587 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.19■□□□□ 0.82
AP4S1Q9Y587 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP4S1Q9Y587 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP4S1Q9Y587 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP4S1Q9Y587 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.18■□□□□ 0.82
AP4S1Q9Y587 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP4S1Q9Y587 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.18■□□□□ 0.82
AP4S1Q9Y587 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.18■□□□□ 0.82
AP4S1Q9Y587 OXCT2P1-201ENST00000447263 1535 ntBASIC20.18■□□□□ 0.82
AP4S1Q9Y587 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
AP4S1Q9Y587 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.18■□□□□ 0.82
AP4S1Q9Y587 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
AP4S1Q9Y587 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP4S1Q9Y587 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP4S1Q9Y587 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.18■□□□□ 0.82
AP4S1Q9Y587 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
AP4S1Q9Y587 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.18■□□□□ 0.82
AP4S1Q9Y587 SNX5-217ENST00000606557 1087 ntBASIC20.18■□□□□ 0.82
AP4S1Q9Y587 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
AP4S1Q9Y587 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP4S1Q9Y587 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
AP4S1Q9Y587 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP4S1Q9Y587 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP4S1Q9Y587 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.18■□□□□ 0.82
AP4S1Q9Y587 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.18■□□□□ 0.82
AP4S1Q9Y587 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP4S1Q9Y587 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP4S1Q9Y587 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
AP4S1Q9Y587 AC026471.6-201ENST00000622954 1905 ntBASIC20.17■□□□□ 0.82
AP4S1Q9Y587 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP4S1Q9Y587 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.17■□□□□ 0.82
AP4S1Q9Y587 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
AP4S1Q9Y587 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.17■□□□□ 0.82
AP4S1Q9Y587 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
AP4S1Q9Y587 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.17■□□□□ 0.82
AP4S1Q9Y587 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP4S1Q9Y587 AC139795.1-202ENST00000500444 432 ntBASIC20.17■□□□□ 0.82
AP4S1Q9Y587 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP4S1Q9Y587 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.17■□□□□ 0.82
AP4S1Q9Y587 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
AP4S1Q9Y587 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.17■□□□□ 0.82
AP4S1Q9Y587 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
AP4S1Q9Y587 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
AP4S1Q9Y587 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP4S1Q9Y587 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
AP4S1Q9Y587 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP4S1Q9Y587 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
AP4S1Q9Y587 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.16■□□□□ 0.82
AP4S1Q9Y587 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
AP4S1Q9Y587 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
AP4S1Q9Y587 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
AP4S1Q9Y587 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
AP4S1Q9Y587 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
AP4S1Q9Y587 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.16■□□□□ 0.82
AP4S1Q9Y587 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.16■□□□□ 0.82
AP4S1Q9Y587 MIR4449-201ENST00000578365 66 ntBASIC20.16■□□□□ 0.82
AP4S1Q9Y587 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.16■□□□□ 0.82
AP4S1Q9Y587 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
AP4S1Q9Y587 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
AP4S1Q9Y587 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.16■□□□□ 0.82
AP4S1Q9Y587 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
AP4S1Q9Y587 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
AP4S1Q9Y587 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
AP4S1Q9Y587 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
AP4S1Q9Y587 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
AP4S1Q9Y587 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
AP4S1Q9Y587 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
AP4S1Q9Y587 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
AP4S1Q9Y587 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
AP4S1Q9Y587 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.15■□□□□ 0.82
AP4S1Q9Y587 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
AP4S1Q9Y587 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
AP4S1Q9Y587 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.15■□□□□ 0.82
AP4S1Q9Y587 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
AP4S1Q9Y587 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.15■□□□□ 0.82
AP4S1Q9Y587 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
AP4S1Q9Y587 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
AP4S1Q9Y587 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
AP4S1Q9Y587 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
AP4S1Q9Y587 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
AP4S1Q9Y587 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
AP4S1Q9Y587 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
AP4S1Q9Y587 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.14■□□□□ 0.82
AP4S1Q9Y587 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.14■□□□□ 0.81
AP4S1Q9Y587 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
AP4S1Q9Y587 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
AP4S1Q9Y587 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.14■□□□□ 0.81
AP4S1Q9Y587 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
AP4S1Q9Y587 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms