Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.81■□□□□ 0.92
TRAF6Q9Y4K3 MIR3621-201ENST00000580529 85 ntBASIC20.81■□□□□ 0.92
TRAF6Q9Y4K3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAF6Q9Y4K3 AC087239.1-201ENST00000622671 572 ntBASIC20.81■□□□□ 0.92
TRAF6Q9Y4K3 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRAF6Q9Y4K3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAF6Q9Y4K3 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRAF6Q9Y4K3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAF6Q9Y4K3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAF6Q9Y4K3 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRAF6Q9Y4K3 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAF6Q9Y4K3 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAF6Q9Y4K3 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.8■□□□□ 0.92
TRAF6Q9Y4K3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAF6Q9Y4K3 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAF6Q9Y4K3 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.8■□□□□ 0.92
TRAF6Q9Y4K3 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRAF6Q9Y4K3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
TRAF6Q9Y4K3 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAF6Q9Y4K3 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRAF6Q9Y4K3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAF6Q9Y4K3 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
TRAF6Q9Y4K3 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.79■□□□□ 0.92
TRAF6Q9Y4K3 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAF6Q9Y4K3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAF6Q9Y4K3 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAF6Q9Y4K3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
TRAF6Q9Y4K3 AC010141.3-201ENST00000456659 717 ntBASIC20.79■□□□□ 0.92
TRAF6Q9Y4K3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.79■□□□□ 0.92
TRAF6Q9Y4K3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.79■□□□□ 0.92
TRAF6Q9Y4K3 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.79■□□□□ 0.92
TRAF6Q9Y4K3 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.79■□□□□ 0.92
TRAF6Q9Y4K3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.79■□□□□ 0.92
TRAF6Q9Y4K3 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAF6Q9Y4K3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRAF6Q9Y4K3 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAF6Q9Y4K3 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
TRAF6Q9Y4K3 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAF6Q9Y4K3 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAF6Q9Y4K3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAF6Q9Y4K3 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.79■□□□□ 0.92
TRAF6Q9Y4K3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
TRAF6Q9Y4K3 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAF6Q9Y4K3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TRAF6Q9Y4K3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAF6Q9Y4K3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAF6Q9Y4K3 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.78■□□□□ 0.92
TRAF6Q9Y4K3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAF6Q9Y4K3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.78■□□□□ 0.92
TRAF6Q9Y4K3 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
TRAF6Q9Y4K3 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.78■□□□□ 0.92
TRAF6Q9Y4K3 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TRAF6Q9Y4K3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
TRAF6Q9Y4K3 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.78■□□□□ 0.92
TRAF6Q9Y4K3 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRAF6Q9Y4K3 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.77■□□□□ 0.92
TRAF6Q9Y4K3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAF6Q9Y4K3 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRAF6Q9Y4K3 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
TRAF6Q9Y4K3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.77■□□□□ 0.92
TRAF6Q9Y4K3 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAF6Q9Y4K3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
TRAF6Q9Y4K3 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAF6Q9Y4K3 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.77■□□□□ 0.91
TRAF6Q9Y4K3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRAF6Q9Y4K3 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRAF6Q9Y4K3 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.76■□□□□ 0.91
TRAF6Q9Y4K3 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAF6Q9Y4K3 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAF6Q9Y4K3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.76■□□□□ 0.91
TRAF6Q9Y4K3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.76■□□□□ 0.91
TRAF6Q9Y4K3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
TRAF6Q9Y4K3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.76■□□□□ 0.91
TRAF6Q9Y4K3 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAF6Q9Y4K3 SRD5A1P1-201ENST00000442297 786 ntBASIC20.76■□□□□ 0.91
TRAF6Q9Y4K3 AC010525.1-201ENST00000585559 441 ntBASIC20.76■□□□□ 0.91
TRAF6Q9Y4K3 AC092171.4-201ENST00000609130 632 ntBASIC20.76■□□□□ 0.91
TRAF6Q9Y4K3 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAF6Q9Y4K3 OXCT2P1-201ENST00000447263 1535 ntBASIC20.76■□□□□ 0.91
TRAF6Q9Y4K3 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
TRAF6Q9Y4K3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAF6Q9Y4K3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.76■□□□□ 0.91
TRAF6Q9Y4K3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAF6Q9Y4K3 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAF6Q9Y4K3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.75■□□□□ 0.91
TRAF6Q9Y4K3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
TRAF6Q9Y4K3 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAF6Q9Y4K3 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.75■□□□□ 0.91
TRAF6Q9Y4K3 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.75■□□□□ 0.91
TRAF6Q9Y4K3 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
TRAF6Q9Y4K3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRAF6Q9Y4K3 AL035685.1-201ENST00000636663 812 ntBASIC20.75■□□□□ 0.91
TRAF6Q9Y4K3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.75■□□□□ 0.91
TRAF6Q9Y4K3 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAF6Q9Y4K3 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAF6Q9Y4K3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAF6Q9Y4K3 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
TRAF6Q9Y4K3 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
TRAF6Q9Y4K3 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAF6Q9Y4K3 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms