Protein–RNA interactions for Protein: Q9Y4C0

NRXN3, Neurexin-3, humanhuman

Predictions only

Length 1,643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN3Q9Y4C0 ADM-205ENST00000528544 586 ntTSL 2 BASIC30.43■■■□□ 2.46
NRXN3Q9Y4C0 FGF8-207ENST00000618991 856 ntTSL 3 BASIC30.43■■■□□ 2.46
NRXN3Q9Y4C0 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
NRXN3Q9Y4C0 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
NRXN3Q9Y4C0 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC30.42■■■□□ 2.46
NRXN3Q9Y4C0 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC30.42■■■□□ 2.46
NRXN3Q9Y4C0 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC30.42■■■□□ 2.46
NRXN3Q9Y4C0 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
NRXN3Q9Y4C0 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC30.42■■■□□ 2.46
NRXN3Q9Y4C0 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC30.42■■■□□ 2.46
NRXN3Q9Y4C0 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC30.42■■■□□ 2.46
NRXN3Q9Y4C0 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
NRXN3Q9Y4C0 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
NRXN3Q9Y4C0 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC30.41■■■□□ 2.46
NRXN3Q9Y4C0 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC30.41■■■□□ 2.46
NRXN3Q9Y4C0 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC30.4■■■□□ 2.46
NRXN3Q9Y4C0 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC30.4■■■□□ 2.46
NRXN3Q9Y4C0 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
NRXN3Q9Y4C0 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC30.4■■■□□ 2.46
NRXN3Q9Y4C0 GCSHP5-201ENST00000443090 522 ntBASIC30.4■■■□□ 2.46
NRXN3Q9Y4C0 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
NRXN3Q9Y4C0 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC30.4■■■□□ 2.46
NRXN3Q9Y4C0 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC30.4■■■□□ 2.46
NRXN3Q9Y4C0 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
NRXN3Q9Y4C0 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC30.4■■■□□ 2.46
NRXN3Q9Y4C0 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC30.4■■■□□ 2.46
NRXN3Q9Y4C0 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC30.4■■■□□ 2.46
NRXN3Q9Y4C0 RHEB-204ENST00000472642 900 ntTSL 3 BASIC30.4■■■□□ 2.46
NRXN3Q9Y4C0 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
NRXN3Q9Y4C0 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC30.4■■■□□ 2.46
NRXN3Q9Y4C0 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC30.4■■■□□ 2.46
NRXN3Q9Y4C0 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
NRXN3Q9Y4C0 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
NRXN3Q9Y4C0 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
NRXN3Q9Y4C0 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.46
NRXN3Q9Y4C0 OR7E47P-201ENST00000546390 1422 ntBASIC30.39■■■□□ 2.46
NRXN3Q9Y4C0 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
NRXN3Q9Y4C0 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
NRXN3Q9Y4C0 AL512625.2-201ENST00000417533 625 ntBASIC30.39■■■□□ 2.46
NRXN3Q9Y4C0 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC30.39■■■□□ 2.46
NRXN3Q9Y4C0 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
NRXN3Q9Y4C0 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC30.38■■■□□ 2.45
NRXN3Q9Y4C0 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
NRXN3Q9Y4C0 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC30.38■■■□□ 2.45
NRXN3Q9Y4C0 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC30.38■■■□□ 2.45
NRXN3Q9Y4C0 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
NRXN3Q9Y4C0 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
NRXN3Q9Y4C0 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC30.38■■■□□ 2.45
NRXN3Q9Y4C0 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC30.38■■■□□ 2.45
NRXN3Q9Y4C0 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC30.38■■■□□ 2.45
NRXN3Q9Y4C0 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC30.38■■■□□ 2.45
NRXN3Q9Y4C0 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC30.38■■■□□ 2.45
NRXN3Q9Y4C0 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
NRXN3Q9Y4C0 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
NRXN3Q9Y4C0 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
NRXN3Q9Y4C0 BX276092.2-201ENST00000417668 665 ntBASIC30.37■■■□□ 2.45
NRXN3Q9Y4C0 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
NRXN3Q9Y4C0 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC30.37■■■□□ 2.45
NRXN3Q9Y4C0 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC30.37■■■□□ 2.45
NRXN3Q9Y4C0 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC30.37■■■□□ 2.45
NRXN3Q9Y4C0 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
NRXN3Q9Y4C0 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
NRXN3Q9Y4C0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC30.37■■■□□ 2.45
NRXN3Q9Y4C0 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC30.37■■■□□ 2.45
NRXN3Q9Y4C0 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
NRXN3Q9Y4C0 KRT18P29-201ENST00000397031 1267 ntBASIC30.36■■■□□ 2.45
NRXN3Q9Y4C0 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC30.36■■■□□ 2.45
NRXN3Q9Y4C0 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC30.36■■■□□ 2.45
NRXN3Q9Y4C0 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
NRXN3Q9Y4C0 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
NRXN3Q9Y4C0 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC30.36■■■□□ 2.45
NRXN3Q9Y4C0 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC30.36■■■□□ 2.45
NRXN3Q9Y4C0 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
NRXN3Q9Y4C0 GAS7-202ENST00000396115 929 ntTSL 5 BASIC30.36■■■□□ 2.45
NRXN3Q9Y4C0 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC30.36■■■□□ 2.45
NRXN3Q9Y4C0 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC30.36■■■□□ 2.45
NRXN3Q9Y4C0 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
NRXN3Q9Y4C0 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC30.36■■■□□ 2.45
NRXN3Q9Y4C0 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
NRXN3Q9Y4C0 THRA-202ENST00000394121 2260 ntTSL 2 BASIC30.35■■■□□ 2.45
NRXN3Q9Y4C0 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
NRXN3Q9Y4C0 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC30.35■■■□□ 2.45
NRXN3Q9Y4C0 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
NRXN3Q9Y4C0 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC30.35■■■□□ 2.45
NRXN3Q9Y4C0 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
NRXN3Q9Y4C0 DUSP5P2-201ENST00000426873 1033 ntBASIC30.35■■■□□ 2.45
NRXN3Q9Y4C0 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC30.35■■■□□ 2.45
NRXN3Q9Y4C0 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
NRXN3Q9Y4C0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
NRXN3Q9Y4C0 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC30.34■■■□□ 2.45
NRXN3Q9Y4C0 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
NRXN3Q9Y4C0 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC30.34■■■□□ 2.45
NRXN3Q9Y4C0 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC30.34■■■□□ 2.45
NRXN3Q9Y4C0 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC30.34■■■□□ 2.45
NRXN3Q9Y4C0 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC30.34■■■□□ 2.45
NRXN3Q9Y4C0 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC30.34■■■□□ 2.45
NRXN3Q9Y4C0 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC30.33■■■□□ 2.45
NRXN3Q9Y4C0 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC30.33■■■□□ 2.45
NRXN3Q9Y4C0 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
NRXN3Q9Y4C0 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC30.33■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms