Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
LRCH1Q9Y2L9 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.29■□□□□ 0.84
LRCH1Q9Y2L9 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRCH1Q9Y2L9 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRCH1Q9Y2L9 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
LRCH1Q9Y2L9 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRCH1Q9Y2L9 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LRCH1Q9Y2L9 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRCH1Q9Y2L9 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRCH1Q9Y2L9 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.28■□□□□ 0.84
LRCH1Q9Y2L9 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRCH1Q9Y2L9 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.28■□□□□ 0.84
LRCH1Q9Y2L9 AL033527.3-201ENST00000566366 1196 ntBASIC20.28■□□□□ 0.84
LRCH1Q9Y2L9 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRCH1Q9Y2L9 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRCH1Q9Y2L9 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRCH1Q9Y2L9 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRCH1Q9Y2L9 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRCH1Q9Y2L9 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRCH1Q9Y2L9 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LRCH1Q9Y2L9 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRCH1Q9Y2L9 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRCH1Q9Y2L9 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRCH1Q9Y2L9 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.27■□□□□ 0.84
LRCH1Q9Y2L9 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRCH1Q9Y2L9 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.27■□□□□ 0.84
LRCH1Q9Y2L9 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRCH1Q9Y2L9 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.27■□□□□ 0.84
LRCH1Q9Y2L9 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRCH1Q9Y2L9 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
LRCH1Q9Y2L9 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
LRCH1Q9Y2L9 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRCH1Q9Y2L9 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
LRCH1Q9Y2L9 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRCH1Q9Y2L9 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
LRCH1Q9Y2L9 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
LRCH1Q9Y2L9 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LRCH1Q9Y2L9 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRCH1Q9Y2L9 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
LRCH1Q9Y2L9 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRCH1Q9Y2L9 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRCH1Q9Y2L9 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.26■□□□□ 0.83
LRCH1Q9Y2L9 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LRCH1Q9Y2L9 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRCH1Q9Y2L9 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRCH1Q9Y2L9 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRCH1Q9Y2L9 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
LRCH1Q9Y2L9 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRCH1Q9Y2L9 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.26■□□□□ 0.83
LRCH1Q9Y2L9 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRCH1Q9Y2L9 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRCH1Q9Y2L9 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRCH1Q9Y2L9 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.26■□□□□ 0.83
LRCH1Q9Y2L9 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.26■□□□□ 0.83
LRCH1Q9Y2L9 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRCH1Q9Y2L9 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRCH1Q9Y2L9 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRCH1Q9Y2L9 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRCH1Q9Y2L9 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRCH1Q9Y2L9 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRCH1Q9Y2L9 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRCH1Q9Y2L9 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.25■□□□□ 0.83
LRCH1Q9Y2L9 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRCH1Q9Y2L9 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRCH1Q9Y2L9 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
LRCH1Q9Y2L9 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.25■□□□□ 0.83
LRCH1Q9Y2L9 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRCH1Q9Y2L9 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
LRCH1Q9Y2L9 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRCH1Q9Y2L9 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
LRCH1Q9Y2L9 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
LRCH1Q9Y2L9 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.25■□□□□ 0.83
LRCH1Q9Y2L9 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
LRCH1Q9Y2L9 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
LRCH1Q9Y2L9 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LRCH1Q9Y2L9 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRCH1Q9Y2L9 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
LRCH1Q9Y2L9 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRCH1Q9Y2L9 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRCH1Q9Y2L9 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
LRCH1Q9Y2L9 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.24■□□□□ 0.83
LRCH1Q9Y2L9 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRCH1Q9Y2L9 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRCH1Q9Y2L9 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.24■□□□□ 0.83
LRCH1Q9Y2L9 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.24■□□□□ 0.83
LRCH1Q9Y2L9 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRCH1Q9Y2L9 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.24■□□□□ 0.83
LRCH1Q9Y2L9 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.23■□□□□ 0.83
LRCH1Q9Y2L9 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.23■□□□□ 0.83
LRCH1Q9Y2L9 AC018445.3-201ENST00000624177 1945 ntBASIC20.23■□□□□ 0.83
LRCH1Q9Y2L9 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
LRCH1Q9Y2L9 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LRCH1Q9Y2L9 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRCH1Q9Y2L9 AP005212.1-201ENST00000581547 1997 ntBASIC20.23■□□□□ 0.83
LRCH1Q9Y2L9 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
LRCH1Q9Y2L9 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRCH1Q9Y2L9 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
LRCH1Q9Y2L9 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRCH1Q9Y2L9 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
LRCH1Q9Y2L9 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms