Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC29.43■■■□□ 2.3
NINLQ9Y2I6 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
NINLQ9Y2I6 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC29.43■■■□□ 2.3
NINLQ9Y2I6 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC29.43■■■□□ 2.3
NINLQ9Y2I6 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC29.43■■■□□ 2.3
NINLQ9Y2I6 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
NINLQ9Y2I6 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
NINLQ9Y2I6 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC29.43■■■□□ 2.3
NINLQ9Y2I6 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
NINLQ9Y2I6 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
NINLQ9Y2I6 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
NINLQ9Y2I6 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
NINLQ9Y2I6 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC29.42■■■□□ 2.3
NINLQ9Y2I6 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
NINLQ9Y2I6 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
NINLQ9Y2I6 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
NINLQ9Y2I6 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
NINLQ9Y2I6 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
NINLQ9Y2I6 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
NINLQ9Y2I6 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC29.42■■■□□ 2.3
NINLQ9Y2I6 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC29.42■■■□□ 2.3
NINLQ9Y2I6 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
NINLQ9Y2I6 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
NINLQ9Y2I6 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
NINLQ9Y2I6 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
NINLQ9Y2I6 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC29.41■■■□□ 2.3
NINLQ9Y2I6 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
NINLQ9Y2I6 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC29.41■■■□□ 2.3
NINLQ9Y2I6 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
NINLQ9Y2I6 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
NINLQ9Y2I6 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
NINLQ9Y2I6 CROCCP5-201ENST00000436658 830 ntBASIC29.4■■■□□ 2.3
NINLQ9Y2I6 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
NINLQ9Y2I6 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC29.4■■■□□ 2.3
NINLQ9Y2I6 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC29.4■■■□□ 2.3
NINLQ9Y2I6 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC29.4■■■□□ 2.3
NINLQ9Y2I6 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC29.4■■■□□ 2.3
NINLQ9Y2I6 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC29.4■■■□□ 2.3
NINLQ9Y2I6 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC29.39■■■□□ 2.3
NINLQ9Y2I6 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC29.39■■■□□ 2.3
NINLQ9Y2I6 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
NINLQ9Y2I6 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC29.39■■■□□ 2.3
NINLQ9Y2I6 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
NINLQ9Y2I6 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC29.39■■■□□ 2.3
NINLQ9Y2I6 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
NINLQ9Y2I6 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC29.39■■■□□ 2.3
NINLQ9Y2I6 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
NINLQ9Y2I6 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC29.39■■■□□ 2.29
NINLQ9Y2I6 SLC7A5P1-201ENST00000568957 537 ntBASIC29.39■■■□□ 2.29
NINLQ9Y2I6 GXYLT1P5-201ENST00000614548 1189 ntBASIC29.39■■■□□ 2.29
NINLQ9Y2I6 AC012676.1-201ENST00000574705 1949 ntBASIC29.38■■■□□ 2.29
NINLQ9Y2I6 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC29.38■■■□□ 2.29
NINLQ9Y2I6 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
NINLQ9Y2I6 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC29.38■■■□□ 2.29
NINLQ9Y2I6 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
NINLQ9Y2I6 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC29.38■■■□□ 2.29
NINLQ9Y2I6 DUX4L16-201ENST00000555130 1264 ntBASIC29.38■■■□□ 2.29
NINLQ9Y2I6 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
NINLQ9Y2I6 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
NINLQ9Y2I6 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
NINLQ9Y2I6 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
NINLQ9Y2I6 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC29.37■■■□□ 2.29
NINLQ9Y2I6 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC29.37■■■□□ 2.29
NINLQ9Y2I6 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
NINLQ9Y2I6 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
NINLQ9Y2I6 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
NINLQ9Y2I6 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
NINLQ9Y2I6 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
NINLQ9Y2I6 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC29.37■■■□□ 2.29
NINLQ9Y2I6 MIR663A-201ENST00000385250 93 ntBASIC29.37■■■□□ 2.29
NINLQ9Y2I6 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC29.37■■■□□ 2.29
NINLQ9Y2I6 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC29.37■■■□□ 2.29
NINLQ9Y2I6 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC29.37■■■□□ 2.29
NINLQ9Y2I6 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC29.37■■■□□ 2.29
NINLQ9Y2I6 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC29.37■■■□□ 2.29
NINLQ9Y2I6 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC29.37■■■□□ 2.29
NINLQ9Y2I6 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC29.37■■■□□ 2.29
NINLQ9Y2I6 AC104771.1-201ENST00000603335 964 ntBASIC29.37■■■□□ 2.29
NINLQ9Y2I6 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
NINLQ9Y2I6 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC29.37■■■□□ 2.29
NINLQ9Y2I6 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
NINLQ9Y2I6 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC29.36■■■□□ 2.29
NINLQ9Y2I6 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC29.36■■■□□ 2.29
NINLQ9Y2I6 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
NINLQ9Y2I6 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC29.36■■■□□ 2.29
NINLQ9Y2I6 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC29.36■■■□□ 2.29
NINLQ9Y2I6 BRI3-207ENST00000539286 699 ntTSL 2 BASIC29.36■■■□□ 2.29
NINLQ9Y2I6 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC29.36■■■□□ 2.29
NINLQ9Y2I6 AC231657.2-201ENST00000624556 255 ntBASIC29.36■■■□□ 2.29
NINLQ9Y2I6 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC29.36■■■□□ 2.29
NINLQ9Y2I6 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
NINLQ9Y2I6 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
NINLQ9Y2I6 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC29.36■■■□□ 2.29
NINLQ9Y2I6 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
NINLQ9Y2I6 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
NINLQ9Y2I6 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
NINLQ9Y2I6 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
NINLQ9Y2I6 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC29.35■■■□□ 2.29
NINLQ9Y2I6 PPP1R14BP3-201ENST00000509033 445 ntBASIC29.35■■■□□ 2.29
NINLQ9Y2I6 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms