Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.3■□□□□ 0.36
FOXA2Q9Y261 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FOXA2Q9Y261 EI24-211ENST00000534546 1544 ntTSL 2 BASIC17.3■□□□□ 0.36
FOXA2Q9Y261 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
FOXA2Q9Y261 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FOXA2Q9Y261 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
FOXA2Q9Y261 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXA2Q9Y261 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FOXA2Q9Y261 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXA2Q9Y261 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.29■□□□□ 0.36
FOXA2Q9Y261 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXA2Q9Y261 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
FOXA2Q9Y261 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXA2Q9Y261 EDA-201ENST00000338901 1233 ntBASIC17.29■□□□□ 0.36
FOXA2Q9Y261 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.29■□□□□ 0.36
FOXA2Q9Y261 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
FOXA2Q9Y261 AC068587.7-201ENST00000641602 218 ntBASIC17.29■□□□□ 0.36
FOXA2Q9Y261 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FOXA2Q9Y261 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.29■□□□□ 0.36
FOXA2Q9Y261 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXA2Q9Y261 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.29■□□□□ 0.36
FOXA2Q9Y261 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
FOXA2Q9Y261 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXA2Q9Y261 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXA2Q9Y261 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXA2Q9Y261 AC133561.4-201ENST00000566112 224 ntBASIC17.28■□□□□ 0.36
FOXA2Q9Y261 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXA2Q9Y261 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
FOXA2Q9Y261 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXA2Q9Y261 OR7E47P-201ENST00000546390 1422 ntBASIC17.28■□□□□ 0.36
FOXA2Q9Y261 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
FOXA2Q9Y261 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
FOXA2Q9Y261 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.28■□□□□ 0.36
FOXA2Q9Y261 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXA2Q9Y261 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.27■□□□□ 0.36
FOXA2Q9Y261 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.27■□□□□ 0.36
FOXA2Q9Y261 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FOXA2Q9Y261 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.27■□□□□ 0.36
FOXA2Q9Y261 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.27■□□□□ 0.36
FOXA2Q9Y261 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FOXA2Q9Y261 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
FOXA2Q9Y261 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
FOXA2Q9Y261 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
FOXA2Q9Y261 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
FOXA2Q9Y261 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FOXA2Q9Y261 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.27■□□□□ 0.36
FOXA2Q9Y261 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.27■□□□□ 0.36
FOXA2Q9Y261 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
FOXA2Q9Y261 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.27■□□□□ 0.36
FOXA2Q9Y261 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.27■□□□□ 0.36
FOXA2Q9Y261 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.27■□□□□ 0.36
FOXA2Q9Y261 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
FOXA2Q9Y261 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
FOXA2Q9Y261 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
FOXA2Q9Y261 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
FOXA2Q9Y261 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.27■□□□□ 0.35
FOXA2Q9Y261 Z98882.1-201ENST00000622160 2253 ntBASIC17.27■□□□□ 0.35
FOXA2Q9Y261 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.27■□□□□ 0.35
FOXA2Q9Y261 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FOXA2Q9Y261 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
FOXA2Q9Y261 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.26■□□□□ 0.35
FOXA2Q9Y261 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FOXA2Q9Y261 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FOXA2Q9Y261 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
FOXA2Q9Y261 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
FOXA2Q9Y261 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
FOXA2Q9Y261 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.26■□□□□ 0.35
FOXA2Q9Y261 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.26■□□□□ 0.35
FOXA2Q9Y261 AL355001.2-201ENST00000620617 1191 ntBASIC17.26■□□□□ 0.35
FOXA2Q9Y261 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.26■□□□□ 0.35
FOXA2Q9Y261 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FOXA2Q9Y261 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FOXA2Q9Y261 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
FOXA2Q9Y261 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FOXA2Q9Y261 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FOXA2Q9Y261 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
FOXA2Q9Y261 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
FOXA2Q9Y261 BX842568.3-201ENST00000418104 571 ntBASIC17.25■□□□□ 0.35
FOXA2Q9Y261 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
FOXA2Q9Y261 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
FOXA2Q9Y261 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.25■□□□□ 0.35
FOXA2Q9Y261 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FOXA2Q9Y261 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.25■□□□□ 0.35
FOXA2Q9Y261 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
FOXA2Q9Y261 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FOXA2Q9Y261 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
FOXA2Q9Y261 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FOXA2Q9Y261 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FOXA2Q9Y261 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
FOXA2Q9Y261 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXA2Q9Y261 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.24■□□□□ 0.35
FOXA2Q9Y261 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXA2Q9Y261 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXA2Q9Y261 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXA2Q9Y261 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.24■□□□□ 0.35
FOXA2Q9Y261 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXA2Q9Y261 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXA2Q9Y261 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.24■□□□□ 0.35
FOXA2Q9Y261 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.24■□□□□ 0.35
FOXA2Q9Y261 SLC47A1P1-202ENST00000449666 945 ntBASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms