Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC33.33■■■□□ 2.93
CDK11AQ9UQ88 OR10C1-204ENST00000622521 1039 ntBASIC33.33■■■□□ 2.93
CDK11AQ9UQ88 MARS-234ENST00000630571 216 ntTSL 5 BASIC33.33■■■□□ 2.93
CDK11AQ9UQ88 MARS-235ENST00000630803 183 ntTSL 3 BASIC33.33■■■□□ 2.93
CDK11AQ9UQ88 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
CDK11AQ9UQ88 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC33.32■■■□□ 2.92
CDK11AQ9UQ88 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC33.32■■■□□ 2.92
CDK11AQ9UQ88 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC33.32■■■□□ 2.92
CDK11AQ9UQ88 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC33.32■■■□□ 2.92
CDK11AQ9UQ88 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
CDK11AQ9UQ88 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
CDK11AQ9UQ88 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC33.31■■■□□ 2.92
CDK11AQ9UQ88 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
CDK11AQ9UQ88 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC33.31■■■□□ 2.92
CDK11AQ9UQ88 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC33.31■■■□□ 2.92
CDK11AQ9UQ88 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
CDK11AQ9UQ88 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
CDK11AQ9UQ88 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC33.31■■■□□ 2.92
CDK11AQ9UQ88 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
CDK11AQ9UQ88 THRA-202ENST00000394121 2260 ntTSL 2 BASIC33.31■■■□□ 2.92
CDK11AQ9UQ88 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC33.3■■■□□ 2.92
CDK11AQ9UQ88 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC33.3■■■□□ 2.92
CDK11AQ9UQ88 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
CDK11AQ9UQ88 MIPEPP3-201ENST00000412105 444 ntBASIC33.3■■■□□ 2.92
CDK11AQ9UQ88 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC33.3■■■□□ 2.92
CDK11AQ9UQ88 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC33.3■■■□□ 2.92
CDK11AQ9UQ88 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC33.3■■■□□ 2.92
CDK11AQ9UQ88 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
CDK11AQ9UQ88 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC33.3■■■□□ 2.92
CDK11AQ9UQ88 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
CDK11AQ9UQ88 MKRN4P-201ENST00000444706 1521 ntBASIC33.29■■■□□ 2.92
CDK11AQ9UQ88 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC33.29■■■□□ 2.92
CDK11AQ9UQ88 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC33.29■■■□□ 2.92
CDK11AQ9UQ88 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC33.29■■■□□ 2.92
CDK11AQ9UQ88 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC33.28■■■□□ 2.92
CDK11AQ9UQ88 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
CDK11AQ9UQ88 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC33.28■■■□□ 2.92
CDK11AQ9UQ88 AL512625.2-201ENST00000417533 625 ntBASIC33.28■■■□□ 2.92
CDK11AQ9UQ88 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC33.28■■■□□ 2.92
CDK11AQ9UQ88 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC33.28■■■□□ 2.92
CDK11AQ9UQ88 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC33.28■■■□□ 2.92
CDK11AQ9UQ88 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
CDK11AQ9UQ88 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC33.28■■■□□ 2.92
CDK11AQ9UQ88 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC33.28■■■□□ 2.92
CDK11AQ9UQ88 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC33.28■■■□□ 2.92
CDK11AQ9UQ88 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC33.28■■■□□ 2.92
CDK11AQ9UQ88 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC33.28■■■□□ 2.92
CDK11AQ9UQ88 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC33.28■■■□□ 2.92
CDK11AQ9UQ88 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC33.27■■■□□ 2.92
CDK11AQ9UQ88 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC33.27■■■□□ 2.92
CDK11AQ9UQ88 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC33.27■■■□□ 2.92
CDK11AQ9UQ88 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC33.27■■■□□ 2.92
CDK11AQ9UQ88 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
CDK11AQ9UQ88 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC33.26■■■□□ 2.92
CDK11AQ9UQ88 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.92
CDK11AQ9UQ88 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.91
CDK11AQ9UQ88 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC33.26■■■□□ 2.91
CDK11AQ9UQ88 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC33.26■■■□□ 2.91
CDK11AQ9UQ88 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC33.26■■■□□ 2.91
CDK11AQ9UQ88 PPP1R14BP2-201ENST00000426284 444 ntBASIC33.26■■■□□ 2.91
CDK11AQ9UQ88 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC33.26■■■□□ 2.91
CDK11AQ9UQ88 PLLP-204ENST00000569059 665 ntTSL 3 BASIC33.26■■■□□ 2.91
CDK11AQ9UQ88 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC33.26■■■□□ 2.91
CDK11AQ9UQ88 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC33.26■■■□□ 2.91
CDK11AQ9UQ88 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC33.26■■■□□ 2.91
CDK11AQ9UQ88 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC33.26■■■□□ 2.91
CDK11AQ9UQ88 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC33.26■■■□□ 2.91
CDK11AQ9UQ88 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.91
CDK11AQ9UQ88 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC33.26■■■□□ 2.91
CDK11AQ9UQ88 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC33.26■■■□□ 2.91
CDK11AQ9UQ88 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC33.25■■■□□ 2.91
CDK11AQ9UQ88 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC33.25■■■□□ 2.91
CDK11AQ9UQ88 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
CDK11AQ9UQ88 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC33.25■■■□□ 2.91
CDK11AQ9UQ88 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC33.25■■■□□ 2.91
CDK11AQ9UQ88 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC33.25■■■□□ 2.91
CDK11AQ9UQ88 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
CDK11AQ9UQ88 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC33.25■■■□□ 2.91
CDK11AQ9UQ88 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC33.24■■■□□ 2.91
CDK11AQ9UQ88 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
CDK11AQ9UQ88 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC33.24■■■□□ 2.91
CDK11AQ9UQ88 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
CDK11AQ9UQ88 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC33.24■■■□□ 2.91
CDK11AQ9UQ88 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
CDK11AQ9UQ88 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC33.24■■■□□ 2.91
CDK11AQ9UQ88 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
CDK11AQ9UQ88 AC069236.1-201ENST00000604339 616 ntBASIC33.24■■■□□ 2.91
CDK11AQ9UQ88 AC092118.2-201ENST00000613495 667 ntBASIC33.24■■■□□ 2.91
CDK11AQ9UQ88 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC33.24■■■□□ 2.91
CDK11AQ9UQ88 AC008694.1-202ENST00000636953 945 ntBASIC33.24■■■□□ 2.91
CDK11AQ9UQ88 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
CDK11AQ9UQ88 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
CDK11AQ9UQ88 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC33.24■■■□□ 2.91
CDK11AQ9UQ88 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC33.23■■■□□ 2.91
CDK11AQ9UQ88 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC33.23■■■□□ 2.91
CDK11AQ9UQ88 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC33.23■■■□□ 2.91
CDK11AQ9UQ88 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC33.23■■■□□ 2.91
CDK11AQ9UQ88 POU5F1P3-201ENST00000428824 1078 ntBASIC33.23■■■□□ 2.91
CDK11AQ9UQ88 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
CDK11AQ9UQ88 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC33.23■■■□□ 2.91
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms