Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.17■□□□□ 0.98
MKS1Q9NXB0 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MKS1Q9NXB0 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.16■□□□□ 0.98
MKS1Q9NXB0 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MKS1Q9NXB0 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
MKS1Q9NXB0 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
MKS1Q9NXB0 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MKS1Q9NXB0 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MKS1Q9NXB0 AC087239.1-201ENST00000622671 572 ntBASIC21.16■□□□□ 0.98
MKS1Q9NXB0 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
MKS1Q9NXB0 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MKS1Q9NXB0 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.16■□□□□ 0.98
MKS1Q9NXB0 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.16■□□□□ 0.98
MKS1Q9NXB0 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MKS1Q9NXB0 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MKS1Q9NXB0 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.15■□□□□ 0.98
MKS1Q9NXB0 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.15■□□□□ 0.98
MKS1Q9NXB0 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
MKS1Q9NXB0 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MKS1Q9NXB0 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.15■□□□□ 0.98
MKS1Q9NXB0 TSPY9P-201ENST00000440215 945 ntBASIC21.15■□□□□ 0.98
MKS1Q9NXB0 TSPY11P-201ENST00000442607 1045 ntBASIC21.15■□□□□ 0.98
MKS1Q9NXB0 AC010141.3-201ENST00000456659 717 ntBASIC21.15■□□□□ 0.98
MKS1Q9NXB0 AL034346.1-201ENST00000568244 1277 ntBASIC21.15■□□□□ 0.98
MKS1Q9NXB0 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.15■□□□□ 0.98
MKS1Q9NXB0 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MKS1Q9NXB0 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MKS1Q9NXB0 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
MKS1Q9NXB0 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
MKS1Q9NXB0 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
MKS1Q9NXB0 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
MKS1Q9NXB0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
MKS1Q9NXB0 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
MKS1Q9NXB0 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.14■□□□□ 0.97
MKS1Q9NXB0 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.14■□□□□ 0.97
MKS1Q9NXB0 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.14■□□□□ 0.97
MKS1Q9NXB0 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.14■□□□□ 0.97
MKS1Q9NXB0 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.14■□□□□ 0.97
MKS1Q9NXB0 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.14■□□□□ 0.97
MKS1Q9NXB0 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
MKS1Q9NXB0 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MKS1Q9NXB0 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
MKS1Q9NXB0 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
MKS1Q9NXB0 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
MKS1Q9NXB0 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MKS1Q9NXB0 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MKS1Q9NXB0 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
MKS1Q9NXB0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MKS1Q9NXB0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
MKS1Q9NXB0 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
MKS1Q9NXB0 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MKS1Q9NXB0 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MKS1Q9NXB0 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.13■□□□□ 0.97
MKS1Q9NXB0 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.13■□□□□ 0.97
MKS1Q9NXB0 AC239859.2-201ENST00000444165 318 ntBASIC21.13■□□□□ 0.97
MKS1Q9NXB0 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.13■□□□□ 0.97
MKS1Q9NXB0 FEM1AP1-201ENST00000431297 1995 ntBASIC21.13■□□□□ 0.97
MKS1Q9NXB0 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MKS1Q9NXB0 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MKS1Q9NXB0 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MKS1Q9NXB0 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
MKS1Q9NXB0 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.12■□□□□ 0.97
MKS1Q9NXB0 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
MKS1Q9NXB0 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MKS1Q9NXB0 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MKS1Q9NXB0 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
MKS1Q9NXB0 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MKS1Q9NXB0 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.12■□□□□ 0.97
MKS1Q9NXB0 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.12■□□□□ 0.97
MKS1Q9NXB0 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MKS1Q9NXB0 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MKS1Q9NXB0 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MKS1Q9NXB0 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.12■□□□□ 0.97
MKS1Q9NXB0 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
MKS1Q9NXB0 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
MKS1Q9NXB0 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MKS1Q9NXB0 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
MKS1Q9NXB0 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
MKS1Q9NXB0 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
MKS1Q9NXB0 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MKS1Q9NXB0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
MKS1Q9NXB0 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MKS1Q9NXB0 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
MKS1Q9NXB0 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.11■□□□□ 0.97
MKS1Q9NXB0 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MKS1Q9NXB0 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MKS1Q9NXB0 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.11■□□□□ 0.97
MKS1Q9NXB0 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
MKS1Q9NXB0 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MKS1Q9NXB0 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.11■□□□□ 0.97
MKS1Q9NXB0 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.11■□□□□ 0.97
MKS1Q9NXB0 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MKS1Q9NXB0 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MKS1Q9NXB0 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MKS1Q9NXB0 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MKS1Q9NXB0 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MKS1Q9NXB0 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MKS1Q9NXB0 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
MKS1Q9NXB0 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MKS1Q9NXB0 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms