Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RLIMQ9NVW2 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.91■□□□□ 0.78
RLIMQ9NVW2 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
RLIMQ9NVW2 AC136469.2-201ENST00000623944 1028 ntBASIC19.91■□□□□ 0.78
RLIMQ9NVW2 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RLIMQ9NVW2 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RLIMQ9NVW2 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RLIMQ9NVW2 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RLIMQ9NVW2 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
RLIMQ9NVW2 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RLIMQ9NVW2 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.9■□□□□ 0.78
RLIMQ9NVW2 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
RLIMQ9NVW2 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RLIMQ9NVW2 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
RLIMQ9NVW2 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RLIMQ9NVW2 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RLIMQ9NVW2 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RLIMQ9NVW2 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.9■□□□□ 0.78
RLIMQ9NVW2 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RLIMQ9NVW2 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.9■□□□□ 0.78
RLIMQ9NVW2 AC011298.3-201ENST00000615796 283 ntBASIC19.9■□□□□ 0.78
RLIMQ9NVW2 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.9■□□□□ 0.78
RLIMQ9NVW2 AC068587.7-201ENST00000641602 218 ntBASIC19.9■□□□□ 0.78
RLIMQ9NVW2 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RLIMQ9NVW2 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RLIMQ9NVW2 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RLIMQ9NVW2 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RLIMQ9NVW2 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RLIMQ9NVW2 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.9■□□□□ 0.78
RLIMQ9NVW2 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.9■□□□□ 0.78
RLIMQ9NVW2 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RLIMQ9NVW2 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RLIMQ9NVW2 Z98882.1-201ENST00000622160 2253 ntBASIC19.9■□□□□ 0.78
RLIMQ9NVW2 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RLIMQ9NVW2 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RLIMQ9NVW2 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.89■□□□□ 0.78
RLIMQ9NVW2 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RLIMQ9NVW2 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RLIMQ9NVW2 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RLIMQ9NVW2 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RLIMQ9NVW2 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RLIMQ9NVW2 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RLIMQ9NVW2 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
RLIMQ9NVW2 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.89■□□□□ 0.77
RLIMQ9NVW2 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RLIMQ9NVW2 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RLIMQ9NVW2 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RLIMQ9NVW2 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.89■□□□□ 0.77
RLIMQ9NVW2 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RLIMQ9NVW2 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.89■□□□□ 0.77
RLIMQ9NVW2 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RLIMQ9NVW2 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RLIMQ9NVW2 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.88■□□□□ 0.77
RLIMQ9NVW2 AC073130.3-201ENST00000624389 2278 ntBASIC19.88■□□□□ 0.77
RLIMQ9NVW2 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RLIMQ9NVW2 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
RLIMQ9NVW2 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RLIMQ9NVW2 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.88■□□□□ 0.77
RLIMQ9NVW2 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.88■□□□□ 0.77
RLIMQ9NVW2 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RLIMQ9NVW2 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RLIMQ9NVW2 SLC47A1P1-202ENST00000449666 945 ntBASIC19.88■□□□□ 0.77
RLIMQ9NVW2 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.88■□□□□ 0.77
RLIMQ9NVW2 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.88■□□□□ 0.77
RLIMQ9NVW2 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
RLIMQ9NVW2 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RLIMQ9NVW2 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RLIMQ9NVW2 AC026471.6-201ENST00000622954 1905 ntBASIC19.88■□□□□ 0.77
RLIMQ9NVW2 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RLIMQ9NVW2 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
RLIMQ9NVW2 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
RLIMQ9NVW2 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
RLIMQ9NVW2 OR7E47P-201ENST00000546390 1422 ntBASIC19.87■□□□□ 0.77
RLIMQ9NVW2 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RLIMQ9NVW2 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RLIMQ9NVW2 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RLIMQ9NVW2 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RLIMQ9NVW2 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
RLIMQ9NVW2 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RLIMQ9NVW2 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RLIMQ9NVW2 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.87■□□□□ 0.77
RLIMQ9NVW2 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.87■□□□□ 0.77
RLIMQ9NVW2 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RLIMQ9NVW2 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RLIMQ9NVW2 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.87■□□□□ 0.77
RLIMQ9NVW2 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
RLIMQ9NVW2 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RLIMQ9NVW2 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RLIMQ9NVW2 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RLIMQ9NVW2 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
RLIMQ9NVW2 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RLIMQ9NVW2 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RLIMQ9NVW2 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RLIMQ9NVW2 AC010141.3-201ENST00000456659 717 ntBASIC19.86■□□□□ 0.77
RLIMQ9NVW2 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.86■□□□□ 0.77
RLIMQ9NVW2 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.86■□□□□ 0.77
RLIMQ9NVW2 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.86■□□□□ 0.77
RLIMQ9NVW2 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.86■□□□□ 0.77
RLIMQ9NVW2 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
RLIMQ9NVW2 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms