Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCM2LQ9NUG4 DUX4L4-201ENST00000566884 1269 ntBASIC20.31■□□□□ 0.84
CCM2LQ9NUG4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCM2LQ9NUG4 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
CCM2LQ9NUG4 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCM2LQ9NUG4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
CCM2LQ9NUG4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.31■□□□□ 0.84
CCM2LQ9NUG4 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.3■□□□□ 0.84
CCM2LQ9NUG4 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.3■□□□□ 0.84
CCM2LQ9NUG4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCM2LQ9NUG4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCM2LQ9NUG4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCM2LQ9NUG4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CCM2LQ9NUG4 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCM2LQ9NUG4 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCM2LQ9NUG4 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.3■□□□□ 0.84
CCM2LQ9NUG4 AC142381.2-201ENST00000566120 298 ntBASIC20.3■□□□□ 0.84
CCM2LQ9NUG4 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.3■□□□□ 0.84
CCM2LQ9NUG4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCM2LQ9NUG4 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCM2LQ9NUG4 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCM2LQ9NUG4 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
CCM2LQ9NUG4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.29■□□□□ 0.84
CCM2LQ9NUG4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
CCM2LQ9NUG4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CCM2LQ9NUG4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.29■□□□□ 0.84
CCM2LQ9NUG4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCM2LQ9NUG4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.29■□□□□ 0.84
CCM2LQ9NUG4 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CCM2LQ9NUG4 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CCM2LQ9NUG4 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.29■□□□□ 0.84
CCM2LQ9NUG4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CCM2LQ9NUG4 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCM2LQ9NUG4 PBX2P1-201ENST00000493219 1291 ntBASIC20.29■□□□□ 0.84
CCM2LQ9NUG4 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCM2LQ9NUG4 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CCM2LQ9NUG4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCM2LQ9NUG4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCM2LQ9NUG4 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCM2LQ9NUG4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
CCM2LQ9NUG4 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCM2LQ9NUG4 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCM2LQ9NUG4 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCM2LQ9NUG4 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCM2LQ9NUG4 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCM2LQ9NUG4 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.28■□□□□ 0.84
CCM2LQ9NUG4 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCM2LQ9NUG4 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.28■□□□□ 0.84
CCM2LQ9NUG4 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCM2LQ9NUG4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CCM2LQ9NUG4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.28■□□□□ 0.84
CCM2LQ9NUG4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCM2LQ9NUG4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCM2LQ9NUG4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCM2LQ9NUG4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.27■□□□□ 0.84
CCM2LQ9NUG4 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCM2LQ9NUG4 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.27■□□□□ 0.84
CCM2LQ9NUG4 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCM2LQ9NUG4 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.27■□□□□ 0.84
CCM2LQ9NUG4 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.27■□□□□ 0.84
CCM2LQ9NUG4 AL512631.2-201ENST00000604634 923 ntBASIC20.27■□□□□ 0.84
CCM2LQ9NUG4 SNX5-217ENST00000606557 1087 ntBASIC20.27■□□□□ 0.84
CCM2LQ9NUG4 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CCM2LQ9NUG4 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCM2LQ9NUG4 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.27■□□□□ 0.84
CCM2LQ9NUG4 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
CCM2LQ9NUG4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CCM2LQ9NUG4 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CCM2LQ9NUG4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.27■□□□□ 0.83
CCM2LQ9NUG4 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
CCM2LQ9NUG4 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.83
CCM2LQ9NUG4 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCM2LQ9NUG4 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCM2LQ9NUG4 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.26■□□□□ 0.83
CCM2LQ9NUG4 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CCM2LQ9NUG4 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCM2LQ9NUG4 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.26■□□□□ 0.83
CCM2LQ9NUG4 AC104564.3-201ENST00000582367 638 ntBASIC20.26■□□□□ 0.83
CCM2LQ9NUG4 AC106739.1-201ENST00000617035 715 ntBASIC20.26■□□□□ 0.83
CCM2LQ9NUG4 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCM2LQ9NUG4 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCM2LQ9NUG4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCM2LQ9NUG4 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCM2LQ9NUG4 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CCM2LQ9NUG4 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCM2LQ9NUG4 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCM2LQ9NUG4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCM2LQ9NUG4 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.26■□□□□ 0.83
CCM2LQ9NUG4 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCM2LQ9NUG4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CCM2LQ9NUG4 AC026271.2-201ENST00000428091 497 ntBASIC20.25■□□□□ 0.83
CCM2LQ9NUG4 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCM2LQ9NUG4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCM2LQ9NUG4 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCM2LQ9NUG4 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.25■□□□□ 0.83
CCM2LQ9NUG4 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CCM2LQ9NUG4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCM2LQ9NUG4 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCM2LQ9NUG4 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CCM2LQ9NUG4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms