Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBQLN4Q9NRR5 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
UBQLN4Q9NRR5 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
UBQLN4Q9NRR5 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.7■□□□□ 0.74
UBQLN4Q9NRR5 AC009237.3-201ENST00000393279 1427 ntBASIC19.7■□□□□ 0.74
UBQLN4Q9NRR5 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.7■□□□□ 0.74
UBQLN4Q9NRR5 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.7■□□□□ 0.74
UBQLN4Q9NRR5 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBQLN4Q9NRR5 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.7■□□□□ 0.74
UBQLN4Q9NRR5 AC012414.1-201ENST00000556676 535 ntBASIC19.7■□□□□ 0.74
UBQLN4Q9NRR5 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.7■□□□□ 0.74
UBQLN4Q9NRR5 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
UBQLN4Q9NRR5 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.7■□□□□ 0.74
UBQLN4Q9NRR5 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.7■□□□□ 0.74
UBQLN4Q9NRR5 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
UBQLN4Q9NRR5 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UBQLN4Q9NRR5 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBQLN4Q9NRR5 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.69■□□□□ 0.74
UBQLN4Q9NRR5 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UBQLN4Q9NRR5 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.69■□□□□ 0.74
UBQLN4Q9NRR5 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.69■□□□□ 0.74
UBQLN4Q9NRR5 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBQLN4Q9NRR5 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UBQLN4Q9NRR5 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
UBQLN4Q9NRR5 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.69■□□□□ 0.74
UBQLN4Q9NRR5 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBQLN4Q9NRR5 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
UBQLN4Q9NRR5 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBQLN4Q9NRR5 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBQLN4Q9NRR5 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBQLN4Q9NRR5 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBQLN4Q9NRR5 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBQLN4Q9NRR5 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBQLN4Q9NRR5 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.68■□□□□ 0.74
UBQLN4Q9NRR5 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.68■□□□□ 0.74
UBQLN4Q9NRR5 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBQLN4Q9NRR5 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
UBQLN4Q9NRR5 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UBQLN4Q9NRR5 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBQLN4Q9NRR5 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBQLN4Q9NRR5 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBQLN4Q9NRR5 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
UBQLN4Q9NRR5 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBQLN4Q9NRR5 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBQLN4Q9NRR5 FBXW4P1-201ENST00000426721 2239 ntBASIC19.67■□□□□ 0.74
UBQLN4Q9NRR5 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.67■□□□□ 0.74
UBQLN4Q9NRR5 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBQLN4Q9NRR5 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
UBQLN4Q9NRR5 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBQLN4Q9NRR5 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBQLN4Q9NRR5 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBQLN4Q9NRR5 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
UBQLN4Q9NRR5 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.67■□□□□ 0.74
UBQLN4Q9NRR5 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
UBQLN4Q9NRR5 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
UBQLN4Q9NRR5 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.67■□□□□ 0.74
UBQLN4Q9NRR5 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.67■□□□□ 0.74
UBQLN4Q9NRR5 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBQLN4Q9NRR5 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.67■□□□□ 0.74
UBQLN4Q9NRR5 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBQLN4Q9NRR5 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
UBQLN4Q9NRR5 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.67■□□□□ 0.74
UBQLN4Q9NRR5 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBQLN4Q9NRR5 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBQLN4Q9NRR5 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBQLN4Q9NRR5 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBQLN4Q9NRR5 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UBQLN4Q9NRR5 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBQLN4Q9NRR5 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBQLN4Q9NRR5 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.66■□□□□ 0.74
UBQLN4Q9NRR5 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
UBQLN4Q9NRR5 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBQLN4Q9NRR5 AC010542.4-201ENST00000563151 1910 ntBASIC19.66■□□□□ 0.74
UBQLN4Q9NRR5 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBQLN4Q9NRR5 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBQLN4Q9NRR5 AP006587.3-201ENST00000525742 1516 ntBASIC19.66■□□□□ 0.74
UBQLN4Q9NRR5 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBQLN4Q9NRR5 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
UBQLN4Q9NRR5 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.65■□□□□ 0.74
UBQLN4Q9NRR5 AC026471.6-201ENST00000622954 1905 ntBASIC19.65■□□□□ 0.74
UBQLN4Q9NRR5 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBQLN4Q9NRR5 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
UBQLN4Q9NRR5 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.65■□□□□ 0.74
UBQLN4Q9NRR5 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
UBQLN4Q9NRR5 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.65■□□□□ 0.74
UBQLN4Q9NRR5 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
UBQLN4Q9NRR5 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.65■□□□□ 0.74
UBQLN4Q9NRR5 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
UBQLN4Q9NRR5 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.74
UBQLN4Q9NRR5 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.64■□□□□ 0.73
UBQLN4Q9NRR5 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBQLN4Q9NRR5 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.64■□□□□ 0.73
UBQLN4Q9NRR5 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
UBQLN4Q9NRR5 AC104564.3-201ENST00000582367 638 ntBASIC19.64■□□□□ 0.73
UBQLN4Q9NRR5 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.64■□□□□ 0.73
UBQLN4Q9NRR5 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.64■□□□□ 0.73
UBQLN4Q9NRR5 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBQLN4Q9NRR5 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.64■□□□□ 0.73
UBQLN4Q9NRR5 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBQLN4Q9NRR5 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms