Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
KCNF1Q9H3M0 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
KCNF1Q9H3M0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC23.39■■□□□ 1.34
KCNF1Q9H3M0 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
KCNF1Q9H3M0 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
KCNF1Q9H3M0 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
KCNF1Q9H3M0 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.39■■□□□ 1.33
KCNF1Q9H3M0 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.39■■□□□ 1.33
KCNF1Q9H3M0 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
KCNF1Q9H3M0 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
KCNF1Q9H3M0 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
KCNF1Q9H3M0 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
KCNF1Q9H3M0 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC23.38■■□□□ 1.33
KCNF1Q9H3M0 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
KCNF1Q9H3M0 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
KCNF1Q9H3M0 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
KCNF1Q9H3M0 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC23.38■■□□□ 1.33
KCNF1Q9H3M0 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
KCNF1Q9H3M0 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
KCNF1Q9H3M0 AC104564.3-201ENST00000582367 638 ntBASIC23.38■■□□□ 1.33
KCNF1Q9H3M0 U85056.1-201ENST00000616429 682 ntBASIC23.38■■□□□ 1.33
KCNF1Q9H3M0 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.38■■□□□ 1.33
KCNF1Q9H3M0 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
KCNF1Q9H3M0 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
KCNF1Q9H3M0 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
KCNF1Q9H3M0 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
KCNF1Q9H3M0 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
KCNF1Q9H3M0 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC23.37■■□□□ 1.33
KCNF1Q9H3M0 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC23.37■■□□□ 1.33
KCNF1Q9H3M0 HYI-210ENST00000486909 905 ntTSL 5 BASIC23.37■■□□□ 1.33
KCNF1Q9H3M0 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC23.37■■□□□ 1.33
KCNF1Q9H3M0 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
KCNF1Q9H3M0 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC23.37■■□□□ 1.33
KCNF1Q9H3M0 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
KCNF1Q9H3M0 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
KCNF1Q9H3M0 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
KCNF1Q9H3M0 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
KCNF1Q9H3M0 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
KCNF1Q9H3M0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
KCNF1Q9H3M0 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
KCNF1Q9H3M0 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
KCNF1Q9H3M0 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
KCNF1Q9H3M0 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
KCNF1Q9H3M0 MIR4449-201ENST00000578365 66 ntBASIC23.36■■□□□ 1.33
KCNF1Q9H3M0 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC23.36■■□□□ 1.33
KCNF1Q9H3M0 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
KCNF1Q9H3M0 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC23.36■■□□□ 1.33
KCNF1Q9H3M0 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC23.36■■□□□ 1.33
KCNF1Q9H3M0 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
KCNF1Q9H3M0 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
KCNF1Q9H3M0 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
KCNF1Q9H3M0 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
KCNF1Q9H3M0 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
KCNF1Q9H3M0 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
KCNF1Q9H3M0 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.35■■□□□ 1.33
KCNF1Q9H3M0 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
KCNF1Q9H3M0 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
KCNF1Q9H3M0 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
KCNF1Q9H3M0 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
KCNF1Q9H3M0 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
KCNF1Q9H3M0 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC23.34■■□□□ 1.33
KCNF1Q9H3M0 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
KCNF1Q9H3M0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
KCNF1Q9H3M0 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
KCNF1Q9H3M0 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
KCNF1Q9H3M0 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
KCNF1Q9H3M0 IDNK-201ENST00000376417 511 ntTSL 5 BASIC23.34■■□□□ 1.33
KCNF1Q9H3M0 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
KCNF1Q9H3M0 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
KCNF1Q9H3M0 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC23.34■■□□□ 1.33
KCNF1Q9H3M0 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23.34■■□□□ 1.33
KCNF1Q9H3M0 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
KCNF1Q9H3M0 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
KCNF1Q9H3M0 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
KCNF1Q9H3M0 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.34■■□□□ 1.33
KCNF1Q9H3M0 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
KCNF1Q9H3M0 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
KCNF1Q9H3M0 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.33■■□□□ 1.33
KCNF1Q9H3M0 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
KCNF1Q9H3M0 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
KCNF1Q9H3M0 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
KCNF1Q9H3M0 RARG-204ENST00000543726 1779 ntTSL 2 BASIC23.33■■□□□ 1.33
KCNF1Q9H3M0 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
KCNF1Q9H3M0 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
KCNF1Q9H3M0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
KCNF1Q9H3M0 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
KCNF1Q9H3M0 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
KCNF1Q9H3M0 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
KCNF1Q9H3M0 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
KCNF1Q9H3M0 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
KCNF1Q9H3M0 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.32■■□□□ 1.32
KCNF1Q9H3M0 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
KCNF1Q9H3M0 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
KCNF1Q9H3M0 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
KCNF1Q9H3M0 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC23.32■■□□□ 1.32
KCNF1Q9H3M0 KRT18P60-201ENST00000312876 1297 ntBASIC23.32■■□□□ 1.32
KCNF1Q9H3M0 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.32■■□□□ 1.32
KCNF1Q9H3M0 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC23.32■■□□□ 1.32
KCNF1Q9H3M0 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
KCNF1Q9H3M0 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms