Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NUCKS1Q9H1E3 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC23.18■■□□□ 1.3
NUCKS1Q9H1E3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC23.18■■□□□ 1.3
NUCKS1Q9H1E3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
NUCKS1Q9H1E3 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC23.17■■□□□ 1.3
NUCKS1Q9H1E3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
NUCKS1Q9H1E3 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NUCKS1Q9H1E3 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
NUCKS1Q9H1E3 AC106739.1-201ENST00000617035 715 ntBASIC23.17■■□□□ 1.3
NUCKS1Q9H1E3 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NUCKS1Q9H1E3 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
NUCKS1Q9H1E3 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NUCKS1Q9H1E3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
NUCKS1Q9H1E3 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NUCKS1Q9H1E3 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NUCKS1Q9H1E3 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.16■■□□□ 1.3
NUCKS1Q9H1E3 AC135279.3-201ENST00000610945 1311 ntBASIC23.16■■□□□ 1.3
NUCKS1Q9H1E3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.16■■□□□ 1.3
NUCKS1Q9H1E3 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NUCKS1Q9H1E3 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.16■■□□□ 1.3
NUCKS1Q9H1E3 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NUCKS1Q9H1E3 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NUCKS1Q9H1E3 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
NUCKS1Q9H1E3 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
NUCKS1Q9H1E3 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NUCKS1Q9H1E3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NUCKS1Q9H1E3 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
NUCKS1Q9H1E3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC23.16■■□□□ 1.3
NUCKS1Q9H1E3 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NUCKS1Q9H1E3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC23.15■■□□□ 1.3
NUCKS1Q9H1E3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC23.15■■□□□ 1.3
NUCKS1Q9H1E3 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NUCKS1Q9H1E3 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NUCKS1Q9H1E3 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
NUCKS1Q9H1E3 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.15■■□□□ 1.3
NUCKS1Q9H1E3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.15■■□□□ 1.3
NUCKS1Q9H1E3 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC23.15■■□□□ 1.3
NUCKS1Q9H1E3 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.15■■□□□ 1.3
NUCKS1Q9H1E3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC23.15■■□□□ 1.3
NUCKS1Q9H1E3 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NUCKS1Q9H1E3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
NUCKS1Q9H1E3 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.14■■□□□ 1.3
NUCKS1Q9H1E3 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
NUCKS1Q9H1E3 OXCT2P1-201ENST00000447263 1535 ntBASIC23.14■■□□□ 1.3
NUCKS1Q9H1E3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
NUCKS1Q9H1E3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
NUCKS1Q9H1E3 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.14■■□□□ 1.29
NUCKS1Q9H1E3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC23.14■■□□□ 1.29
NUCKS1Q9H1E3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
NUCKS1Q9H1E3 AC005229.4-201ENST00000610085 2198 ntBASIC23.14■■□□□ 1.29
NUCKS1Q9H1E3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC23.14■■□□□ 1.29
NUCKS1Q9H1E3 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
NUCKS1Q9H1E3 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NUCKS1Q9H1E3 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC23.13■■□□□ 1.29
NUCKS1Q9H1E3 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NUCKS1Q9H1E3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC23.13■■□□□ 1.29
NUCKS1Q9H1E3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NUCKS1Q9H1E3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
NUCKS1Q9H1E3 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.13■■□□□ 1.29
NUCKS1Q9H1E3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.13■■□□□ 1.29
NUCKS1Q9H1E3 AL034346.1-201ENST00000568244 1277 ntBASIC23.13■■□□□ 1.29
NUCKS1Q9H1E3 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
NUCKS1Q9H1E3 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
NUCKS1Q9H1E3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
NUCKS1Q9H1E3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
NUCKS1Q9H1E3 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
NUCKS1Q9H1E3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC23.12■■□□□ 1.29
NUCKS1Q9H1E3 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
NUCKS1Q9H1E3 AL138724.1-201ENST00000606771 1088 ntBASIC23.12■■□□□ 1.29
NUCKS1Q9H1E3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NUCKS1Q9H1E3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
NUCKS1Q9H1E3 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NUCKS1Q9H1E3 AC026471.6-201ENST00000622954 1905 ntBASIC23.12■■□□□ 1.29
NUCKS1Q9H1E3 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
NUCKS1Q9H1E3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC23.11■■□□□ 1.29
NUCKS1Q9H1E3 FEM1AP4-201ENST00000443167 1987 ntBASIC23.11■■□□□ 1.29
NUCKS1Q9H1E3 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.11■■□□□ 1.29
NUCKS1Q9H1E3 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NUCKS1Q9H1E3 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NUCKS1Q9H1E3 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC23.11■■□□□ 1.29
NUCKS1Q9H1E3 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NUCKS1Q9H1E3 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.11■■□□□ 1.29
NUCKS1Q9H1E3 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NUCKS1Q9H1E3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC23.11■■□□□ 1.29
NUCKS1Q9H1E3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
NUCKS1Q9H1E3 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NUCKS1Q9H1E3 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
NUCKS1Q9H1E3 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NUCKS1Q9H1E3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NUCKS1Q9H1E3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC23.1■■□□□ 1.29
NUCKS1Q9H1E3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
NUCKS1Q9H1E3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NUCKS1Q9H1E3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
NUCKS1Q9H1E3 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
NUCKS1Q9H1E3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NUCKS1Q9H1E3 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.1■■□□□ 1.29
NUCKS1Q9H1E3 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
NUCKS1Q9H1E3 AC133561.4-201ENST00000566112 224 ntBASIC23.1■■□□□ 1.29
NUCKS1Q9H1E3 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.1■■□□□ 1.29
NUCKS1Q9H1E3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms