Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
RTFDC1Q9BY42 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
RTFDC1Q9BY42 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RTFDC1Q9BY42 PRORSD1P-201ENST00000295112 541 ntBASIC26.23■■□□□ 1.79
RTFDC1Q9BY42 BMP1-204ENST00000397814 836 ntTSL 4 BASIC26.23■■□□□ 1.79
RTFDC1Q9BY42 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC26.23■■□□□ 1.79
RTFDC1Q9BY42 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
RTFDC1Q9BY42 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC26.23■■□□□ 1.79
RTFDC1Q9BY42 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC26.23■■□□□ 1.79
RTFDC1Q9BY42 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC26.23■■□□□ 1.79
RTFDC1Q9BY42 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC26.23■■□□□ 1.79
RTFDC1Q9BY42 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC26.22■■□□□ 1.79
RTFDC1Q9BY42 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RTFDC1Q9BY42 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RTFDC1Q9BY42 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RTFDC1Q9BY42 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RTFDC1Q9BY42 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RTFDC1Q9BY42 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC26.22■■□□□ 1.79
RTFDC1Q9BY42 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RTFDC1Q9BY42 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC26.22■■□□□ 1.79
RTFDC1Q9BY42 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RTFDC1Q9BY42 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RTFDC1Q9BY42 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RTFDC1Q9BY42 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC26.22■■□□□ 1.79
RTFDC1Q9BY42 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
RTFDC1Q9BY42 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RTFDC1Q9BY42 RNA5SP413-201ENST00000516373 109 ntBASIC26.21■■□□□ 1.79
RTFDC1Q9BY42 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC26.21■■□□□ 1.79
RTFDC1Q9BY42 AL034346.1-201ENST00000568244 1277 ntBASIC26.21■■□□□ 1.79
RTFDC1Q9BY42 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC26.21■■□□□ 1.79
RTFDC1Q9BY42 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
RTFDC1Q9BY42 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RTFDC1Q9BY42 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC26.2■■□□□ 1.79
RTFDC1Q9BY42 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
RTFDC1Q9BY42 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
RTFDC1Q9BY42 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC26.2■■□□□ 1.78
RTFDC1Q9BY42 LINC00526-201ENST00000581067 1875 ntBASIC26.2■■□□□ 1.78
RTFDC1Q9BY42 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC26.2■■□□□ 1.78
RTFDC1Q9BY42 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
RTFDC1Q9BY42 AC093787.1-201ENST00000450396 207 ntBASIC26.2■■□□□ 1.78
RTFDC1Q9BY42 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC26.2■■□□□ 1.78
RTFDC1Q9BY42 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC26.2■■□□□ 1.78
RTFDC1Q9BY42 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC26.2■■□□□ 1.78
RTFDC1Q9BY42 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
RTFDC1Q9BY42 OR7E47P-201ENST00000546390 1422 ntBASIC26.2■■□□□ 1.78
RTFDC1Q9BY42 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC26.2■■□□□ 1.78
RTFDC1Q9BY42 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
RTFDC1Q9BY42 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC26.2■■□□□ 1.78
RTFDC1Q9BY42 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
RTFDC1Q9BY42 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC26.19■■□□□ 1.78
RTFDC1Q9BY42 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RTFDC1Q9BY42 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC26.19■■□□□ 1.78
RTFDC1Q9BY42 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC26.19■■□□□ 1.78
RTFDC1Q9BY42 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC26.19■■□□□ 1.78
RTFDC1Q9BY42 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RTFDC1Q9BY42 KRT18P29-201ENST00000397031 1267 ntBASIC26.19■■□□□ 1.78
RTFDC1Q9BY42 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RTFDC1Q9BY42 PHB2-213ENST00000546111 858 ntTSL 2 BASIC26.19■■□□□ 1.78
RTFDC1Q9BY42 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
RTFDC1Q9BY42 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
RTFDC1Q9BY42 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
RTFDC1Q9BY42 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC26.18■■□□□ 1.78
RTFDC1Q9BY42 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
RTFDC1Q9BY42 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
RTFDC1Q9BY42 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC26.18■■□□□ 1.78
RTFDC1Q9BY42 AP006587.3-201ENST00000525742 1516 ntBASIC26.18■■□□□ 1.78
RTFDC1Q9BY42 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
RTFDC1Q9BY42 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RTFDC1Q9BY42 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RTFDC1Q9BY42 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC26.17■■□□□ 1.78
RTFDC1Q9BY42 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC26.17■■□□□ 1.78
RTFDC1Q9BY42 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC26.17■■□□□ 1.78
RTFDC1Q9BY42 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC26.17■■□□□ 1.78
RTFDC1Q9BY42 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC26.17■■□□□ 1.78
RTFDC1Q9BY42 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC26.17■■□□□ 1.78
RTFDC1Q9BY42 MYC-209ENST00000641252 345 ntBASIC26.17■■□□□ 1.78
RTFDC1Q9BY42 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
RTFDC1Q9BY42 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
RTFDC1Q9BY42 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
RTFDC1Q9BY42 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RTFDC1Q9BY42 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
RTFDC1Q9BY42 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
RTFDC1Q9BY42 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
RTFDC1Q9BY42 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC26.16■■□□□ 1.78
RTFDC1Q9BY42 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
RTFDC1Q9BY42 AC016405.3-201ENST00000607710 860 ntBASIC26.16■■□□□ 1.78
RTFDC1Q9BY42 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC26.16■■□□□ 1.78
RTFDC1Q9BY42 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
RTFDC1Q9BY42 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC26.16■■□□□ 1.78
RTFDC1Q9BY42 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
RTFDC1Q9BY42 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
RTFDC1Q9BY42 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
RTFDC1Q9BY42 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC26.16■■□□□ 1.78
RTFDC1Q9BY42 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
RTFDC1Q9BY42 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RTFDC1Q9BY42 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
RTFDC1Q9BY42 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RTFDC1Q9BY42 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RTFDC1Q9BY42 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC26.15■■□□□ 1.78
RTFDC1Q9BY42 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms