Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CGREF1Q99674 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CGREF1Q99674 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CGREF1Q99674 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CGREF1Q99674 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CGREF1Q99674 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CGREF1Q99674 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CGREF1Q99674 pRNA.6-201ENST00000610482 90 ntBASIC20.3■□□□□ 0.84
CGREF1Q99674 pRNA.5-201ENST00000612139 90 ntBASIC20.3■□□□□ 0.84
CGREF1Q99674 pRNA.11-201ENST00000618423 90 ntBASIC20.3■□□□□ 0.84
CGREF1Q99674 pRNA.13-201ENST00000619112 90 ntBASIC20.3■□□□□ 0.84
CGREF1Q99674 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CGREF1Q99674 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CGREF1Q99674 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CGREF1Q99674 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.3■□□□□ 0.84
CGREF1Q99674 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CGREF1Q99674 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.29■□□□□ 0.84
CGREF1Q99674 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CGREF1Q99674 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CGREF1Q99674 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CGREF1Q99674 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.29■□□□□ 0.84
CGREF1Q99674 AC006455.2-201ENST00000429931 906 ntBASIC20.29■□□□□ 0.84
CGREF1Q99674 MIR6724-1-201ENST00000616420 92 ntBASIC20.29■□□□□ 0.84
CGREF1Q99674 MIR6724-2-201ENST00000616483 92 ntBASIC20.29■□□□□ 0.84
CGREF1Q99674 MIR6724-4-201ENST00000617390 92 ntBASIC20.29■□□□□ 0.84
CGREF1Q99674 MIR6724-3-201ENST00000622482 92 ntBASIC20.29■□□□□ 0.84
CGREF1Q99674 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.29■□□□□ 0.84
CGREF1Q99674 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CGREF1Q99674 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CGREF1Q99674 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CGREF1Q99674 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CGREF1Q99674 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CGREF1Q99674 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CGREF1Q99674 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.29■□□□□ 0.84
CGREF1Q99674 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.29■□□□□ 0.84
CGREF1Q99674 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.29■□□□□ 0.84
CGREF1Q99674 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.28■□□□□ 0.84
CGREF1Q99674 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CGREF1Q99674 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CGREF1Q99674 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CGREF1Q99674 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CGREF1Q99674 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CGREF1Q99674 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
CGREF1Q99674 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CGREF1Q99674 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CGREF1Q99674 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CGREF1Q99674 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.28■□□□□ 0.84
CGREF1Q99674 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.28■□□□□ 0.84
CGREF1Q99674 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CGREF1Q99674 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.27■□□□□ 0.84
CGREF1Q99674 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CGREF1Q99674 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CGREF1Q99674 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CGREF1Q99674 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CGREF1Q99674 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CGREF1Q99674 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CGREF1Q99674 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CGREF1Q99674 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CGREF1Q99674 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CGREF1Q99674 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.26■□□□□ 0.83
CGREF1Q99674 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.26■□□□□ 0.83
CGREF1Q99674 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CGREF1Q99674 AL157384.1-201ENST00000445995 2473 ntBASIC20.26■□□□□ 0.83
CGREF1Q99674 AC068587.7-201ENST00000641602 218 ntBASIC20.26■□□□□ 0.83
CGREF1Q99674 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.26■□□□□ 0.83
CGREF1Q99674 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CGREF1Q99674 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CGREF1Q99674 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CGREF1Q99674 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
CGREF1Q99674 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CGREF1Q99674 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CGREF1Q99674 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CGREF1Q99674 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.25■□□□□ 0.83
CGREF1Q99674 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CGREF1Q99674 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.25■□□□□ 0.83
CGREF1Q99674 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CGREF1Q99674 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CGREF1Q99674 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CGREF1Q99674 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.25■□□□□ 0.83
CGREF1Q99674 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.25■□□□□ 0.83
CGREF1Q99674 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CGREF1Q99674 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CGREF1Q99674 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CGREF1Q99674 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CGREF1Q99674 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CGREF1Q99674 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CGREF1Q99674 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.24■□□□□ 0.83
CGREF1Q99674 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.24■□□□□ 0.83
CGREF1Q99674 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CGREF1Q99674 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CGREF1Q99674 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.24■□□□□ 0.83
CGREF1Q99674 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CGREF1Q99674 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CGREF1Q99674 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.24■□□□□ 0.83
CGREF1Q99674 AC009299.2-201ENST00000482477 511 ntBASIC20.24■□□□□ 0.83
CGREF1Q99674 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.24■□□□□ 0.83
CGREF1Q99674 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.24■□□□□ 0.83
CGREF1Q99674 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CGREF1Q99674 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.24■□□□□ 0.83
CGREF1Q99674 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms