Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC22.3■■□□□ 1.16
NOTCH4Q99466 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.29■■□□□ 1.16
NOTCH4Q99466 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NOTCH4Q99466 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.29■■□□□ 1.16
NOTCH4Q99466 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.29■■□□□ 1.16
NOTCH4Q99466 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NOTCH4Q99466 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
NOTCH4Q99466 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
NOTCH4Q99466 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
NOTCH4Q99466 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NOTCH4Q99466 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
NOTCH4Q99466 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NOTCH4Q99466 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
NOTCH4Q99466 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
NOTCH4Q99466 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC22.28■■□□□ 1.16
NOTCH4Q99466 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC22.28■■□□□ 1.16
NOTCH4Q99466 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC22.28■■□□□ 1.16
NOTCH4Q99466 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.28■■□□□ 1.16
NOTCH4Q99466 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
NOTCH4Q99466 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC22.28■■□□□ 1.16
NOTCH4Q99466 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC22.28■■□□□ 1.16
NOTCH4Q99466 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NOTCH4Q99466 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NOTCH4Q99466 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.28■■□□□ 1.16
NOTCH4Q99466 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.28■■□□□ 1.16
NOTCH4Q99466 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
NOTCH4Q99466 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC22.28■■□□□ 1.16
NOTCH4Q99466 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC22.28■■□□□ 1.16
NOTCH4Q99466 PHB2-213ENST00000546111 858 ntTSL 2 BASIC22.28■■□□□ 1.16
NOTCH4Q99466 PLLP-204ENST00000569059 665 ntTSL 3 BASIC22.28■■□□□ 1.16
NOTCH4Q99466 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
NOTCH4Q99466 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NOTCH4Q99466 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
NOTCH4Q99466 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.27■■□□□ 1.16
NOTCH4Q99466 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC22.27■■□□□ 1.16
NOTCH4Q99466 AC105036.2-201ENST00000569468 176 ntBASIC22.27■■□□□ 1.16
NOTCH4Q99466 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
NOTCH4Q99466 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
NOTCH4Q99466 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC22.27■■□□□ 1.15
NOTCH4Q99466 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC22.27■■□□□ 1.15
NOTCH4Q99466 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.15
NOTCH4Q99466 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
NOTCH4Q99466 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC22.27■■□□□ 1.15
NOTCH4Q99466 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NOTCH4Q99466 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
NOTCH4Q99466 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NOTCH4Q99466 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC22.26■■□□□ 1.15
NOTCH4Q99466 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
NOTCH4Q99466 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
NOTCH4Q99466 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NOTCH4Q99466 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC22.26■■□□□ 1.15
NOTCH4Q99466 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC22.26■■□□□ 1.15
NOTCH4Q99466 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC22.26■■□□□ 1.15
NOTCH4Q99466 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC22.26■■□□□ 1.15
NOTCH4Q99466 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.26■■□□□ 1.15
NOTCH4Q99466 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NOTCH4Q99466 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC22.25■■□□□ 1.15
NOTCH4Q99466 MKRN4P-201ENST00000444706 1521 ntBASIC22.25■■□□□ 1.15
NOTCH4Q99466 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
NOTCH4Q99466 TBCB-214ENST00000629269 413 ntTSL 5 BASIC22.24■■□□□ 1.15
NOTCH4Q99466 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
NOTCH4Q99466 SLC7A5P1-201ENST00000568957 537 ntBASIC22.24■■□□□ 1.15
NOTCH4Q99466 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC22.24■■□□□ 1.15
NOTCH4Q99466 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NOTCH4Q99466 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NOTCH4Q99466 AC137767.1-201ENST00000602918 1920 ntBASIC22.24■■□□□ 1.15
NOTCH4Q99466 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NOTCH4Q99466 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
NOTCH4Q99466 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.23■■□□□ 1.15
NOTCH4Q99466 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
NOTCH4Q99466 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC22.23■■□□□ 1.15
NOTCH4Q99466 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
NOTCH4Q99466 BMP1-204ENST00000397814 836 ntTSL 4 BASIC22.23■■□□□ 1.15
NOTCH4Q99466 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC22.23■■□□□ 1.15
NOTCH4Q99466 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC22.23■■□□□ 1.15
NOTCH4Q99466 AC016405.3-201ENST00000607710 860 ntBASIC22.23■■□□□ 1.15
NOTCH4Q99466 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
NOTCH4Q99466 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
NOTCH4Q99466 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC22.23■■□□□ 1.15
NOTCH4Q99466 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.23■■□□□ 1.15
NOTCH4Q99466 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC22.23■■□□□ 1.15
NOTCH4Q99466 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NOTCH4Q99466 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
NOTCH4Q99466 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC22.23■■□□□ 1.15
NOTCH4Q99466 BET1L-204ENST00000410108 637 ntTSL 3 BASIC22.23■■□□□ 1.15
NOTCH4Q99466 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC22.23■■□□□ 1.15
NOTCH4Q99466 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC22.23■■□□□ 1.15
NOTCH4Q99466 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC22.23■■□□□ 1.15
NOTCH4Q99466 AC053503.5-201ENST00000601508 636 ntBASIC22.23■■□□□ 1.15
NOTCH4Q99466 AC083880.1-201ENST00000608266 535 ntBASIC22.23■■□□□ 1.15
NOTCH4Q99466 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC22.23■■□□□ 1.15
NOTCH4Q99466 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NOTCH4Q99466 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC22.23■■□□□ 1.15
NOTCH4Q99466 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
NOTCH4Q99466 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NOTCH4Q99466 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NOTCH4Q99466 TERF1P5-201ENST00000477545 1207 ntBASIC22.22■■□□□ 1.15
NOTCH4Q99466 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
NOTCH4Q99466 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
NOTCH4Q99466 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms