Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 pRNA.6-201ENST00000610482 90 ntBASIC19.4■□□□□ 0.7
SNX18Q96RF0 pRNA.5-201ENST00000612139 90 ntBASIC19.4■□□□□ 0.7
SNX18Q96RF0 pRNA.11-201ENST00000618423 90 ntBASIC19.4■□□□□ 0.7
SNX18Q96RF0 pRNA.13-201ENST00000619112 90 ntBASIC19.4■□□□□ 0.7
SNX18Q96RF0 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNX18Q96RF0 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.4■□□□□ 0.7
SNX18Q96RF0 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX18Q96RF0 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.4■□□□□ 0.7
SNX18Q96RF0 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX18Q96RF0 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX18Q96RF0 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNX18Q96RF0 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNX18Q96RF0 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SNX18Q96RF0 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.39■□□□□ 0.69
SNX18Q96RF0 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SNX18Q96RF0 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNX18Q96RF0 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
SNX18Q96RF0 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.39■□□□□ 0.69
SNX18Q96RF0 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNX18Q96RF0 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.39■□□□□ 0.69
SNX18Q96RF0 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.39■□□□□ 0.69
SNX18Q96RF0 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SNX18Q96RF0 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNX18Q96RF0 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.39■□□□□ 0.69
SNX18Q96RF0 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNX18Q96RF0 FBXW4P1-201ENST00000426721 2239 ntBASIC19.39■□□□□ 0.69
SNX18Q96RF0 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SNX18Q96RF0 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SNX18Q96RF0 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNX18Q96RF0 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
SNX18Q96RF0 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SNX18Q96RF0 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNX18Q96RF0 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.38■□□□□ 0.69
SNX18Q96RF0 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNX18Q96RF0 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNX18Q96RF0 MIR935-201ENST00000401179 91 ntBASIC19.38■□□□□ 0.69
SNX18Q96RF0 AC006455.2-201ENST00000429931 906 ntBASIC19.38■□□□□ 0.69
SNX18Q96RF0 AC096631.2-201ENST00000436136 790 ntBASIC19.38■□□□□ 0.69
SNX18Q96RF0 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.38■□□□□ 0.69
SNX18Q96RF0 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SNX18Q96RF0 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.38■□□□□ 0.69
SNX18Q96RF0 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.38■□□□□ 0.69
SNX18Q96RF0 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.38■□□□□ 0.69
SNX18Q96RF0 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.38■□□□□ 0.69
SNX18Q96RF0 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNX18Q96RF0 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNX18Q96RF0 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.37■□□□□ 0.69
SNX18Q96RF0 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SNX18Q96RF0 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNX18Q96RF0 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNX18Q96RF0 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SNX18Q96RF0 AL512631.2-201ENST00000604634 923 ntBASIC19.37■□□□□ 0.69
SNX18Q96RF0 AC099791.2-201ENST00000605725 427 ntBASIC19.37■□□□□ 0.69
SNX18Q96RF0 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SNX18Q96RF0 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.37■□□□□ 0.69
SNX18Q96RF0 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNX18Q96RF0 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SNX18Q96RF0 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNX18Q96RF0 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNX18Q96RF0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SNX18Q96RF0 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.36■□□□□ 0.69
SNX18Q96RF0 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNX18Q96RF0 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.36■□□□□ 0.69
SNX18Q96RF0 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNX18Q96RF0 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNX18Q96RF0 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNX18Q96RF0 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SNX18Q96RF0 OR2I1P-207ENST00000453522 948 ntBASIC19.36■□□□□ 0.69
SNX18Q96RF0 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.36■□□□□ 0.69
SNX18Q96RF0 AC110285.6-201ENST00000617652 491 ntBASIC19.36■□□□□ 0.69
SNX18Q96RF0 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.36■□□□□ 0.69
SNX18Q96RF0 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.36■□□□□ 0.69
SNX18Q96RF0 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.36■□□□□ 0.69
SNX18Q96RF0 AC026310.3-201ENST00000625186 2373 ntBASIC19.36■□□□□ 0.69
SNX18Q96RF0 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNX18Q96RF0 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.36■□□□□ 0.69
SNX18Q96RF0 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SNX18Q96RF0 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNX18Q96RF0 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.36■□□□□ 0.69
SNX18Q96RF0 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SNX18Q96RF0 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNX18Q96RF0 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.35■□□□□ 0.69
SNX18Q96RF0 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.35■□□□□ 0.69
SNX18Q96RF0 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNX18Q96RF0 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SNX18Q96RF0 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.35■□□□□ 0.69
SNX18Q96RF0 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNX18Q96RF0 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
SNX18Q96RF0 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.35■□□□□ 0.69
SNX18Q96RF0 AC079089.2-201ENST00000531211 1277 ntBASIC19.35■□□□□ 0.69
SNX18Q96RF0 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SNX18Q96RF0 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNX18Q96RF0 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SNX18Q96RF0 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNX18Q96RF0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SNX18Q96RF0 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNX18Q96RF0 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX18Q96RF0 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SNX18Q96RF0 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX18Q96RF0 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms