Protein–RNA interactions for Protein: Q96QV6

HIST1H2AA, Histone H2A type 1-A, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AAQ96QV6 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H2AAQ96QV6 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
HIST1H2AAQ96QV6 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H2AAQ96QV6 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H2AAQ96QV6 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H2AAQ96QV6 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H2AAQ96QV6 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H2AAQ96QV6 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H2AAQ96QV6 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
HIST1H2AAQ96QV6 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H2AAQ96QV6 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H2AAQ96QV6 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.5■□□□□ 0.55
HIST1H2AAQ96QV6 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.5■□□□□ 0.55
HIST1H2AAQ96QV6 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.5■□□□□ 0.55
HIST1H2AAQ96QV6 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
HIST1H2AAQ96QV6 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
HIST1H2AAQ96QV6 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H2AAQ96QV6 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H2AAQ96QV6 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
HIST1H2AAQ96QV6 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H2AAQ96QV6 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H2AAQ96QV6 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H2AAQ96QV6 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.49■□□□□ 0.55
HIST1H2AAQ96QV6 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H2AAQ96QV6 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H2AAQ96QV6 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H2AAQ96QV6 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H2AAQ96QV6 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H2AAQ96QV6 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
HIST1H2AAQ96QV6 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H2AAQ96QV6 AC138932.1-201ENST00000534164 6830 ntBASIC18.49■□□□□ 0.55
HIST1H2AAQ96QV6 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
HIST1H2AAQ96QV6 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
HIST1H2AAQ96QV6 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.49■□□□□ 0.55
HIST1H2AAQ96QV6 SLC47A1P1-202ENST00000449666 945 ntBASIC18.49■□□□□ 0.55
HIST1H2AAQ96QV6 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H2AAQ96QV6 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.49■□□□□ 0.55
HIST1H2AAQ96QV6 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
HIST1H2AAQ96QV6 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
HIST1H2AAQ96QV6 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.49■□□□□ 0.55
HIST1H2AAQ96QV6 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H2AAQ96QV6 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H2AAQ96QV6 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H2AAQ96QV6 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.49■□□□□ 0.55
HIST1H2AAQ96QV6 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H2AAQ96QV6 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H2AAQ96QV6 AC135279.3-201ENST00000610945 1311 ntBASIC18.49■□□□□ 0.55
HIST1H2AAQ96QV6 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H2AAQ96QV6 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H2AAQ96QV6 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H2AAQ96QV6 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.48■□□□□ 0.55
HIST1H2AAQ96QV6 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
HIST1H2AAQ96QV6 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H2AAQ96QV6 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H2AAQ96QV6 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H2AAQ96QV6 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.48■□□□□ 0.55
HIST1H2AAQ96QV6 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.48■□□□□ 0.55
HIST1H2AAQ96QV6 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H2AAQ96QV6 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIST1H2AAQ96QV6 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIST1H2AAQ96QV6 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.47■□□□□ 0.55
HIST1H2AAQ96QV6 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HIST1H2AAQ96QV6 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.47■□□□□ 0.55
HIST1H2AAQ96QV6 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.47■□□□□ 0.55
HIST1H2AAQ96QV6 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
HIST1H2AAQ96QV6 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIST1H2AAQ96QV6 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HIST1H2AAQ96QV6 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIST1H2AAQ96QV6 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
HIST1H2AAQ96QV6 BX842568.3-201ENST00000418104 571 ntBASIC18.47■□□□□ 0.55
HIST1H2AAQ96QV6 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HIST1H2AAQ96QV6 MIR4767-201ENST00000582827 78 ntBASIC18.47■□□□□ 0.55
HIST1H2AAQ96QV6 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIST1H2AAQ96QV6 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
HIST1H2AAQ96QV6 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIST1H2AAQ96QV6 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIST1H2AAQ96QV6 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HIST1H2AAQ96QV6 FBXW4P1-201ENST00000426721 2239 ntBASIC18.46■□□□□ 0.55
HIST1H2AAQ96QV6 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HIST1H2AAQ96QV6 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIST1H2AAQ96QV6 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.46■□□□□ 0.55
HIST1H2AAQ96QV6 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIST1H2AAQ96QV6 AC024257.2-201ENST00000549699 147 ntBASIC18.46■□□□□ 0.55
HIST1H2AAQ96QV6 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.46■□□□□ 0.55
HIST1H2AAQ96QV6 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
HIST1H2AAQ96QV6 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIST1H2AAQ96QV6 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIST1H2AAQ96QV6 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
HIST1H2AAQ96QV6 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
HIST1H2AAQ96QV6 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.45■□□□□ 0.54
HIST1H2AAQ96QV6 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIST1H2AAQ96QV6 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HIST1H2AAQ96QV6 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIST1H2AAQ96QV6 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
HIST1H2AAQ96QV6 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HIST1H2AAQ96QV6 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HIST1H2AAQ96QV6 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.45■□□□□ 0.54
HIST1H2AAQ96QV6 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.45■□□□□ 0.54
HIST1H2AAQ96QV6 PBX2P1-201ENST00000493219 1291 ntBASIC18.45■□□□□ 0.54
HIST1H2AAQ96QV6 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms