Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH15Q96QU1 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH15Q96QU1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH15Q96QU1 AP004607.7-201ENST00000527152 1677 ntBASIC21.04■□□□□ 0.96
PCDH15Q96QU1 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH15Q96QU1 LINC01960-201ENST00000563759 1884 ntBASIC21.04■□□□□ 0.96
PCDH15Q96QU1 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH15Q96QU1 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.04■□□□□ 0.96
PCDH15Q96QU1 AC092118.2-201ENST00000613495 667 ntBASIC21.04■□□□□ 0.96
PCDH15Q96QU1 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
PCDH15Q96QU1 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
PCDH15Q96QU1 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH15Q96QU1 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH15Q96QU1 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDH15Q96QU1 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PCDH15Q96QU1 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH15Q96QU1 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH15Q96QU1 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH15Q96QU1 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.03■□□□□ 0.96
PCDH15Q96QU1 OR10C1-204ENST00000622521 1039 ntBASIC21.03■□□□□ 0.96
PCDH15Q96QU1 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
PCDH15Q96QU1 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH15Q96QU1 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH15Q96QU1 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.03■□□□□ 0.96
PCDH15Q96QU1 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDH15Q96QU1 TERF1P5-201ENST00000477545 1207 ntBASIC21.03■□□□□ 0.96
PCDH15Q96QU1 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.03■□□□□ 0.96
PCDH15Q96QU1 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH15Q96QU1 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH15Q96QU1 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.03■□□□□ 0.96
PCDH15Q96QU1 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH15Q96QU1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH15Q96QU1 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH15Q96QU1 KRT18P29-201ENST00000397031 1267 ntBASIC21.02■□□□□ 0.96
PCDH15Q96QU1 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
PCDH15Q96QU1 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH15Q96QU1 AC093787.1-201ENST00000450396 207 ntBASIC21.02■□□□□ 0.96
PCDH15Q96QU1 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.02■□□□□ 0.96
PCDH15Q96QU1 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.02■□□□□ 0.96
PCDH15Q96QU1 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDH15Q96QU1 AC079089.2-201ENST00000531211 1277 ntBASIC21.02■□□□□ 0.96
PCDH15Q96QU1 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.02■□□□□ 0.96
PCDH15Q96QU1 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH15Q96QU1 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
PCDH15Q96QU1 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.95
PCDH15Q96QU1 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
PCDH15Q96QU1 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH15Q96QU1 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.01■□□□□ 0.95
PCDH15Q96QU1 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.01■□□□□ 0.95
PCDH15Q96QU1 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH15Q96QU1 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.01■□□□□ 0.95
PCDH15Q96QU1 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.01■□□□□ 0.95
PCDH15Q96QU1 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH15Q96QU1 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
PCDH15Q96QU1 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH15Q96QU1 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH15Q96QU1 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH15Q96QU1 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.01■□□□□ 0.95
PCDH15Q96QU1 AL034346.1-201ENST00000568244 1277 ntBASIC21.01■□□□□ 0.95
PCDH15Q96QU1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.01■□□□□ 0.95
PCDH15Q96QU1 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH15Q96QU1 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH15Q96QU1 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDH15Q96QU1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDH15Q96QU1 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21■□□□□ 0.95
PCDH15Q96QU1 GCSHP5-201ENST00000443090 522 ntBASIC21■□□□□ 0.95
PCDH15Q96QU1 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
PCDH15Q96QU1 ADM-205ENST00000528544 586 ntTSL 2 BASIC21■□□□□ 0.95
PCDH15Q96QU1 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21■□□□□ 0.95
PCDH15Q96QU1 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21■□□□□ 0.95
PCDH15Q96QU1 AP006587.3-201ENST00000525742 1516 ntBASIC21■□□□□ 0.95
PCDH15Q96QU1 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDH15Q96QU1 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH15Q96QU1 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
PCDH15Q96QU1 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
PCDH15Q96QU1 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.99■□□□□ 0.95
PCDH15Q96QU1 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.99■□□□□ 0.95
PCDH15Q96QU1 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.99■□□□□ 0.95
PCDH15Q96QU1 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.99■□□□□ 0.95
PCDH15Q96QU1 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
PCDH15Q96QU1 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH15Q96QU1 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH15Q96QU1 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
PCDH15Q96QU1 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
PCDH15Q96QU1 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH15Q96QU1 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH15Q96QU1 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.99■□□□□ 0.95
PCDH15Q96QU1 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH15Q96QU1 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PCDH15Q96QU1 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.99■□□□□ 0.95
PCDH15Q96QU1 AC093323.1-202ENST00000635031 2045 ntBASIC20.99■□□□□ 0.95
PCDH15Q96QU1 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH15Q96QU1 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH15Q96QU1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
PCDH15Q96QU1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
PCDH15Q96QU1 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDH15Q96QU1 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.98■□□□□ 0.95
PCDH15Q96QU1 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDH15Q96QU1 AL512625.2-201ENST00000417533 625 ntBASIC20.98■□□□□ 0.95
PCDH15Q96QU1 DUSP5P2-201ENST00000426873 1033 ntBASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms