Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S3Q96PC3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S3Q96PC3 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
AP1S3Q96PC3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC16.13■□□□□ 0.17
AP1S3Q96PC3 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S3Q96PC3 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
AP1S3Q96PC3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
AP1S3Q96PC3 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC16.13■□□□□ 0.17
AP1S3Q96PC3 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
AP1S3Q96PC3 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP1S3Q96PC3 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP1S3Q96PC3 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
AP1S3Q96PC3 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC16.12■□□□□ 0.17
AP1S3Q96PC3 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
AP1S3Q96PC3 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC16.12■□□□□ 0.17
AP1S3Q96PC3 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP1S3Q96PC3 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
AP1S3Q96PC3 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP1S3Q96PC3 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP1S3Q96PC3 AC129492.7-201ENST00000622992 756 ntBASIC16.12■□□□□ 0.17
AP1S3Q96PC3 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
AP1S3Q96PC3 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP1S3Q96PC3 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP1S3Q96PC3 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP1S3Q96PC3 AL391422.3-201ENST00000603791 2761 ntBASIC16.12■□□□□ 0.17
AP1S3Q96PC3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC16.12■□□□□ 0.17
AP1S3Q96PC3 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
AP1S3Q96PC3 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC16.12■□□□□ 0.17
AP1S3Q96PC3 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
AP1S3Q96PC3 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
AP1S3Q96PC3 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC16.11■□□□□ 0.17
AP1S3Q96PC3 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
AP1S3Q96PC3 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP1S3Q96PC3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP1S3Q96PC3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP1S3Q96PC3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP1S3Q96PC3 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP1S3Q96PC3 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP1S3Q96PC3 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
AP1S3Q96PC3 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP1S3Q96PC3 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
AP1S3Q96PC3 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP1S3Q96PC3 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
AP1S3Q96PC3 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC16.11■□□□□ 0.17
AP1S3Q96PC3 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
AP1S3Q96PC3 AC139530.1-201ENST00000575312 1977 ntBASIC16.11■□□□□ 0.17
AP1S3Q96PC3 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
AP1S3Q96PC3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC16.11■□□□□ 0.17
AP1S3Q96PC3 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.1■□□□□ 0.17
AP1S3Q96PC3 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
AP1S3Q96PC3 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP1S3Q96PC3 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP1S3Q96PC3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
AP1S3Q96PC3 AF106564.1-201ENST00000607058 2553 ntBASIC16.1■□□□□ 0.17
AP1S3Q96PC3 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC16.1■□□□□ 0.17
AP1S3Q96PC3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
AP1S3Q96PC3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
AP1S3Q96PC3 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC16.1■□□□□ 0.17
AP1S3Q96PC3 MTX2-204ENST00000443241 799 ntTSL 3 BASIC16.1■□□□□ 0.17
AP1S3Q96PC3 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC16.1■□□□□ 0.17
AP1S3Q96PC3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC16.1■□□□□ 0.17
AP1S3Q96PC3 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP1S3Q96PC3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP1S3Q96PC3 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP1S3Q96PC3 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP1S3Q96PC3 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
AP1S3Q96PC3 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP1S3Q96PC3 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
AP1S3Q96PC3 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC16.09■□□□□ 0.17
AP1S3Q96PC3 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
AP1S3Q96PC3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
AP1S3Q96PC3 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP1S3Q96PC3 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP1S3Q96PC3 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
AP1S3Q96PC3 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP1S3Q96PC3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
AP1S3Q96PC3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
AP1S3Q96PC3 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP1S3Q96PC3 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP1S3Q96PC3 AC004448.1-201ENST00000458332 883 ntBASIC16.09■□□□□ 0.17
AP1S3Q96PC3 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP1S3Q96PC3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP1S3Q96PC3 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC16.09■□□□□ 0.17
AP1S3Q96PC3 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP1S3Q96PC3 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
AP1S3Q96PC3 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
AP1S3Q96PC3 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP1S3Q96PC3 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
AP1S3Q96PC3 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
AP1S3Q96PC3 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
AP1S3Q96PC3 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC16.08■□□□□ 0.16
AP1S3Q96PC3 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
AP1S3Q96PC3 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
AP1S3Q96PC3 AC120024.1-201ENST00000562672 995 ntBASIC16.08■□□□□ 0.16
AP1S3Q96PC3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC16.08■□□□□ 0.16
AP1S3Q96PC3 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
AP1S3Q96PC3 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC16.08■□□□□ 0.16
AP1S3Q96PC3 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
AP1S3Q96PC3 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.08■□□□□ 0.16
AP1S3Q96PC3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms