Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SPG11Q96JI7 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SPG11Q96JI7 AC026366.1-201ENST00000488803 879 ntBASIC18.28■□□□□ 0.52
SPG11Q96JI7 UNC93B4-201ENST00000505679 747 ntBASIC18.28■□□□□ 0.52
SPG11Q96JI7 KRT18P20-201ENST00000548986 1279 ntBASIC18.28■□□□□ 0.52
SPG11Q96JI7 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.27■□□□□ 0.52
SPG11Q96JI7 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SPG11Q96JI7 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.27■□□□□ 0.52
SPG11Q96JI7 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
SPG11Q96JI7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC18.27■□□□□ 0.52
SPG11Q96JI7 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SPG11Q96JI7 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SPG11Q96JI7 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SPG11Q96JI7 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SPG11Q96JI7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.27■□□□□ 0.51
SPG11Q96JI7 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.27■□□□□ 0.51
SPG11Q96JI7 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.27■□□□□ 0.51
SPG11Q96JI7 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
SPG11Q96JI7 TERF1P5-201ENST00000477545 1207 ntBASIC18.27■□□□□ 0.51
SPG11Q96JI7 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC18.27■□□□□ 0.51
SPG11Q96JI7 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SPG11Q96JI7 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SPG11Q96JI7 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SPG11Q96JI7 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SPG11Q96JI7 ECEL1P3-201ENST00000427961 737 ntBASIC18.26■□□□□ 0.51
SPG11Q96JI7 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SPG11Q96JI7 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.26■□□□□ 0.51
SPG11Q96JI7 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SPG11Q96JI7 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SPG11Q96JI7 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SPG11Q96JI7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SPG11Q96JI7 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
SPG11Q96JI7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
SPG11Q96JI7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SPG11Q96JI7 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SPG11Q96JI7 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
SPG11Q96JI7 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.25■□□□□ 0.51
SPG11Q96JI7 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.25■□□□□ 0.51
SPG11Q96JI7 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SPG11Q96JI7 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SPG11Q96JI7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.25■□□□□ 0.51
SPG11Q96JI7 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.25■□□□□ 0.51
SPG11Q96JI7 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SPG11Q96JI7 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SPG11Q96JI7 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SPG11Q96JI7 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.25■□□□□ 0.51
SPG11Q96JI7 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SPG11Q96JI7 MIPEPP3-201ENST00000412105 444 ntBASIC18.25■□□□□ 0.51
SPG11Q96JI7 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SPG11Q96JI7 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.25■□□□□ 0.51
SPG11Q96JI7 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SPG11Q96JI7 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SPG11Q96JI7 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SPG11Q96JI7 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.25■□□□□ 0.51
SPG11Q96JI7 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SPG11Q96JI7 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SPG11Q96JI7 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SPG11Q96JI7 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SPG11Q96JI7 FAM210CP-201ENST00000445714 574 ntBASIC18.24■□□□□ 0.51
SPG11Q96JI7 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SPG11Q96JI7 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.24■□□□□ 0.51
SPG11Q96JI7 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.24■□□□□ 0.51
SPG11Q96JI7 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SPG11Q96JI7 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SPG11Q96JI7 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SPG11Q96JI7 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SPG11Q96JI7 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.24■□□□□ 0.51
SPG11Q96JI7 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SPG11Q96JI7 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SPG11Q96JI7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SPG11Q96JI7 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SPG11Q96JI7 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.23■□□□□ 0.51
SPG11Q96JI7 AC211429.1-201ENST00000415277 523 ntBASIC18.23■□□□□ 0.51
SPG11Q96JI7 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SPG11Q96JI7 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.23■□□□□ 0.51
SPG11Q96JI7 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SPG11Q96JI7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
SPG11Q96JI7 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.23■□□□□ 0.51
SPG11Q96JI7 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SPG11Q96JI7 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.23■□□□□ 0.51
SPG11Q96JI7 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.23■□□□□ 0.51
SPG11Q96JI7 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SPG11Q96JI7 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.23■□□□□ 0.51
SPG11Q96JI7 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC18.22■□□□□ 0.51
SPG11Q96JI7 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.22■□□□□ 0.51
SPG11Q96JI7 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.22■□□□□ 0.51
SPG11Q96JI7 AL162412.1-201ENST00000567129 965 ntBASIC18.22■□□□□ 0.51
SPG11Q96JI7 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SPG11Q96JI7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SPG11Q96JI7 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.22■□□□□ 0.51
SPG11Q96JI7 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SPG11Q96JI7 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
SPG11Q96JI7 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.22■□□□□ 0.51
SPG11Q96JI7 AC073648.6-201ENST00000641589 218 ntBASIC18.22■□□□□ 0.51
SPG11Q96JI7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SPG11Q96JI7 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SPG11Q96JI7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SPG11Q96JI7 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.22■□□□□ 0.51
SPG11Q96JI7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.21■□□□□ 0.51
SPG11Q96JI7 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms