Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC8.89□□□□□ -0.99
SYNE2Q8WXH0 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC8.89□□□□□ -0.99
SYNE2Q8WXH0 KRT18P22-201ENST00000402024 1347 ntBASIC8.89□□□□□ -0.99
SYNE2Q8WXH0 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC8.89□□□□□ -0.99
SYNE2Q8WXH0 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
SYNE2Q8WXH0 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC8.89□□□□□ -0.99
SYNE2Q8WXH0 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC8.89□□□□□ -0.99
SYNE2Q8WXH0 AL671883.3-201ENST00000603274 991 ntBASIC8.89□□□□□ -0.99
SYNE2Q8WXH0 AL031133.1-201ENST00000406807 723 ntBASIC8.89□□□□□ -0.99
SYNE2Q8WXH0 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC8.89□□□□□ -0.99
SYNE2Q8WXH0 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC8.89□□□□□ -0.99
SYNE2Q8WXH0 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SYNE2Q8WXH0 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
SYNE2Q8WXH0 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
SYNE2Q8WXH0 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC8.89□□□□□ -0.99
SYNE2Q8WXH0 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC8.89□□□□□ -0.99
SYNE2Q8WXH0 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC8.89□□□□□ -0.99
SYNE2Q8WXH0 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
SYNE2Q8WXH0 DUT-205ENST00000558813 769 ntTSL 2 BASIC8.89□□□□□ -0.99
SYNE2Q8WXH0 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
SYNE2Q8WXH0 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
SYNE2Q8WXH0 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC8.89□□□□□ -0.99
SYNE2Q8WXH0 AL358472.4-201ENST00000633140 710 ntBASIC8.89□□□□□ -0.99
SYNE2Q8WXH0 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC8.88□□□□□ -0.99
SYNE2Q8WXH0 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC8.88□□□□□ -0.99
SYNE2Q8WXH0 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SYNE2Q8WXH0 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
SYNE2Q8WXH0 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
SYNE2Q8WXH0 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
SYNE2Q8WXH0 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
SYNE2Q8WXH0 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC8.88□□□□□ -0.99
SYNE2Q8WXH0 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC8.88□□□□□ -0.99
SYNE2Q8WXH0 CYP2D8P-201ENST00000433633 1490 ntBASIC8.88□□□□□ -0.99
SYNE2Q8WXH0 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
SYNE2Q8WXH0 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC8.88□□□□□ -0.99
SYNE2Q8WXH0 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC8.88□□□□□ -0.99
SYNE2Q8WXH0 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
SYNE2Q8WXH0 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC8.88□□□□□ -0.99
SYNE2Q8WXH0 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
SYNE2Q8WXH0 AC092183.1-201ENST00000469884 875 ntBASIC8.88□□□□□ -0.99
SYNE2Q8WXH0 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC8.88□□□□□ -0.99
SYNE2Q8WXH0 CLN6-214ENST00000636314 442 ntTSL 3 BASIC8.88□□□□□ -0.99
SYNE2Q8WXH0 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SYNE2Q8WXH0 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC8.88□□□□□ -0.99
SYNE2Q8WXH0 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SYNE2Q8WXH0 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SYNE2Q8WXH0 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SYNE2Q8WXH0 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
SYNE2Q8WXH0 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC8.88□□□□□ -0.99
SYNE2Q8WXH0 GATS-209ENST00000454084 1030 ntTSL 3 BASIC8.88□□□□□ -0.99
SYNE2Q8WXH0 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC8.88□□□□□ -0.99
SYNE2Q8WXH0 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC8.88□□□□□ -0.99
SYNE2Q8WXH0 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC8.88□□□□□ -0.99
SYNE2Q8WXH0 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
SYNE2Q8WXH0 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SYNE2Q8WXH0 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC8.87□□□□□ -0.99
SYNE2Q8WXH0 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
SYNE2Q8WXH0 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
SYNE2Q8WXH0 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC8.87□□□□□ -0.99
SYNE2Q8WXH0 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
SYNE2Q8WXH0 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC8.87□□□□□ -0.99
SYNE2Q8WXH0 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC8.87□□□□□ -0.99
SYNE2Q8WXH0 SERP1-208ENST00000491660 830 ntTSL 2 BASIC8.87□□□□□ -0.99
SYNE2Q8WXH0 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC8.87□□□□□ -0.99
SYNE2Q8WXH0 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC8.87□□□□□ -0.99
SYNE2Q8WXH0 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC8.87□□□□□ -0.99
SYNE2Q8WXH0 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
SYNE2Q8WXH0 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC8.87□□□□□ -0.99
SYNE2Q8WXH0 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC8.87□□□□□ -0.99
SYNE2Q8WXH0 AC026471.5-201ENST00000615068 467 ntBASIC8.87□□□□□ -0.99
SYNE2Q8WXH0 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
SYNE2Q8WXH0 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
SYNE2Q8WXH0 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC8.87□□□□□ -0.99
SYNE2Q8WXH0 LY6E-205ENST00000519611 635 ntTSL 3 BASIC8.87□□□□□ -0.99
SYNE2Q8WXH0 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
SYNE2Q8WXH0 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
SYNE2Q8WXH0 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
SYNE2Q8WXH0 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC8.87□□□□□ -0.99
SYNE2Q8WXH0 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
SYNE2Q8WXH0 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
SYNE2Q8WXH0 COPE-203ENST00000351079 907 ntTSL 2 BASIC8.87□□□□□ -0.99
SYNE2Q8WXH0 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC8.87□□□□□ -0.99
SYNE2Q8WXH0 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC8.87□□□□□ -0.99
SYNE2Q8WXH0 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC8.87□□□□□ -0.99
SYNE2Q8WXH0 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
SYNE2Q8WXH0 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC8.87□□□□□ -0.99
SYNE2Q8WXH0 AC010980.2-201ENST00000587099 1412 ntBASIC8.87□□□□□ -0.99
SYNE2Q8WXH0 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC8.87□□□□□ -0.99
SYNE2Q8WXH0 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC8.87□□□□□ -0.99
SYNE2Q8WXH0 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC8.87□□□□□ -0.99
SYNE2Q8WXH0 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC8.87□□□□□ -0.99
SYNE2Q8WXH0 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC8.87□□□□□ -0.99
SYNE2Q8WXH0 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
SYNE2Q8WXH0 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC8.87□□□□□ -0.99
SYNE2Q8WXH0 AC104076.2-201ENST00000448912 469 ntBASIC8.86□□□□□ -0.99
SYNE2Q8WXH0 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC8.86□□□□□ -0.99
SYNE2Q8WXH0 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC8.86□□□□□ -0.99
SYNE2Q8WXH0 HOTTIP_1.1-201ENST00000620415 57 ntBASIC8.86□□□□□ -0.99
SYNE2Q8WXH0 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
SYNE2Q8WXH0 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC8.86□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms