Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 ABHD17AP5-201ENST00000580133 923 ntBASIC19.57■□□□□ 0.72
TRUB1Q8WWH5 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
TRUB1Q8WWH5 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRUB1Q8WWH5 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.57■□□□□ 0.72
TRUB1Q8WWH5 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.57■□□□□ 0.72
TRUB1Q8WWH5 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.57■□□□□ 0.72
TRUB1Q8WWH5 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRUB1Q8WWH5 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.56■□□□□ 0.72
TRUB1Q8WWH5 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRUB1Q8WWH5 AC004987.1-201ENST00000428627 508 ntBASIC19.56■□□□□ 0.72
TRUB1Q8WWH5 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
TRUB1Q8WWH5 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRUB1Q8WWH5 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRUB1Q8WWH5 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRUB1Q8WWH5 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRUB1Q8WWH5 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.56■□□□□ 0.72
TRUB1Q8WWH5 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRUB1Q8WWH5 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRUB1Q8WWH5 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRUB1Q8WWH5 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
TRUB1Q8WWH5 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRUB1Q8WWH5 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRUB1Q8WWH5 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.55■□□□□ 0.72
TRUB1Q8WWH5 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRUB1Q8WWH5 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.55■□□□□ 0.72
TRUB1Q8WWH5 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRUB1Q8WWH5 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.55■□□□□ 0.72
TRUB1Q8WWH5 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TRUB1Q8WWH5 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.55■□□□□ 0.72
TRUB1Q8WWH5 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
TRUB1Q8WWH5 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRUB1Q8WWH5 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRUB1Q8WWH5 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.55■□□□□ 0.72
TRUB1Q8WWH5 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRUB1Q8WWH5 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRUB1Q8WWH5 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.55■□□□□ 0.72
TRUB1Q8WWH5 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.55■□□□□ 0.72
TRUB1Q8WWH5 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRUB1Q8WWH5 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
TRUB1Q8WWH5 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
TRUB1Q8WWH5 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.54■□□□□ 0.72
TRUB1Q8WWH5 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
TRUB1Q8WWH5 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRUB1Q8WWH5 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
TRUB1Q8WWH5 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.54■□□□□ 0.72
TRUB1Q8WWH5 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRUB1Q8WWH5 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRUB1Q8WWH5 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TRUB1Q8WWH5 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRUB1Q8WWH5 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRUB1Q8WWH5 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.54■□□□□ 0.72
TRUB1Q8WWH5 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.54■□□□□ 0.72
TRUB1Q8WWH5 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRUB1Q8WWH5 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRUB1Q8WWH5 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRUB1Q8WWH5 AL020996.1-203ENST00000536896 2307 ntBASIC19.53■□□□□ 0.72
TRUB1Q8WWH5 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
TRUB1Q8WWH5 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
TRUB1Q8WWH5 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.53■□□□□ 0.72
TRUB1Q8WWH5 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRUB1Q8WWH5 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.53■□□□□ 0.72
TRUB1Q8WWH5 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.53■□□□□ 0.72
TRUB1Q8WWH5 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRUB1Q8WWH5 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.53■□□□□ 0.72
TRUB1Q8WWH5 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.53■□□□□ 0.72
TRUB1Q8WWH5 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TRUB1Q8WWH5 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.53■□□□□ 0.72
TRUB1Q8WWH5 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRUB1Q8WWH5 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRUB1Q8WWH5 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRUB1Q8WWH5 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRUB1Q8WWH5 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRUB1Q8WWH5 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.52■□□□□ 0.72
TRUB1Q8WWH5 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRUB1Q8WWH5 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRUB1Q8WWH5 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.52■□□□□ 0.72
TRUB1Q8WWH5 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRUB1Q8WWH5 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.52■□□□□ 0.72
TRUB1Q8WWH5 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRUB1Q8WWH5 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRUB1Q8WWH5 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.52■□□□□ 0.72
TRUB1Q8WWH5 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.52■□□□□ 0.72
TRUB1Q8WWH5 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.52■□□□□ 0.72
TRUB1Q8WWH5 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRUB1Q8WWH5 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRUB1Q8WWH5 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRUB1Q8WWH5 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
TRUB1Q8WWH5 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
TRUB1Q8WWH5 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRUB1Q8WWH5 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
TRUB1Q8WWH5 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRUB1Q8WWH5 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRUB1Q8WWH5 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRUB1Q8WWH5 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
TRUB1Q8WWH5 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRUB1Q8WWH5 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.71
TRUB1Q8WWH5 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
TRUB1Q8WWH5 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.52■□□□□ 0.71
TRUB1Q8WWH5 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRUB1Q8WWH5 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms