Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC107Q8WV48 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC107Q8WV48 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC107Q8WV48 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.42■□□□□ 0.54
CCDC107Q8WV48 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CCDC107Q8WV48 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.42■□□□□ 0.54
CCDC107Q8WV48 UNC93B8-201ENST00000511903 705 ntBASIC18.42■□□□□ 0.54
CCDC107Q8WV48 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
CCDC107Q8WV48 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.42■□□□□ 0.54
CCDC107Q8WV48 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC107Q8WV48 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CCDC107Q8WV48 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
CCDC107Q8WV48 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC107Q8WV48 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC107Q8WV48 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC107Q8WV48 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC107Q8WV48 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC107Q8WV48 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC107Q8WV48 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC107Q8WV48 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC107Q8WV48 DUX4L4-201ENST00000566884 1269 ntBASIC18.41■□□□□ 0.54
CCDC107Q8WV48 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC107Q8WV48 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC107Q8WV48 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC107Q8WV48 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC107Q8WV48 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC107Q8WV48 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC107Q8WV48 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.4■□□□□ 0.54
CCDC107Q8WV48 AC009086.3-201ENST00000623486 1008 ntBASIC18.4■□□□□ 0.54
CCDC107Q8WV48 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.4■□□□□ 0.54
CCDC107Q8WV48 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC107Q8WV48 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC107Q8WV48 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CCDC107Q8WV48 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC107Q8WV48 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC107Q8WV48 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC107Q8WV48 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC107Q8WV48 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CCDC107Q8WV48 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC107Q8WV48 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC107Q8WV48 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
CCDC107Q8WV48 AC004687.1-201ENST00000579003 1625 ntBASIC18.39■□□□□ 0.53
CCDC107Q8WV48 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC107Q8WV48 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC107Q8WV48 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC107Q8WV48 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC107Q8WV48 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CCDC107Q8WV48 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC107Q8WV48 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC107Q8WV48 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC107Q8WV48 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC107Q8WV48 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CCDC107Q8WV48 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CCDC107Q8WV48 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.38■□□□□ 0.53
CCDC107Q8WV48 MIR6724-1-201ENST00000616420 92 ntBASIC18.38■□□□□ 0.53
CCDC107Q8WV48 MIR6724-2-201ENST00000616483 92 ntBASIC18.38■□□□□ 0.53
CCDC107Q8WV48 MIR6724-4-201ENST00000617390 92 ntBASIC18.38■□□□□ 0.53
CCDC107Q8WV48 MIR6724-3-201ENST00000622482 92 ntBASIC18.38■□□□□ 0.53
CCDC107Q8WV48 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC107Q8WV48 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CCDC107Q8WV48 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC107Q8WV48 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CCDC107Q8WV48 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CCDC107Q8WV48 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC107Q8WV48 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC107Q8WV48 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC107Q8WV48 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCDC107Q8WV48 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CCDC107Q8WV48 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC107Q8WV48 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC107Q8WV48 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCDC107Q8WV48 KRT16P3-201ENST00000439127 1283 ntBASIC18.37■□□□□ 0.53
CCDC107Q8WV48 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC107Q8WV48 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC107Q8WV48 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC107Q8WV48 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC107Q8WV48 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CCDC107Q8WV48 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC107Q8WV48 C17orf82-201ENST00000623772 1530 ntBASIC18.37■□□□□ 0.53
CCDC107Q8WV48 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CCDC107Q8WV48 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC107Q8WV48 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC107Q8WV48 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC107Q8WV48 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC107Q8WV48 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC107Q8WV48 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC107Q8WV48 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC107Q8WV48 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC107Q8WV48 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CCDC107Q8WV48 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC107Q8WV48 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC107Q8WV48 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC107Q8WV48 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.36■□□□□ 0.53
CCDC107Q8WV48 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC107Q8WV48 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CCDC107Q8WV48 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC107Q8WV48 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC107Q8WV48 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC107Q8WV48 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC107Q8WV48 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms