Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZNF248Q8NDW4 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZNF248Q8NDW4 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZNF248Q8NDW4 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
ZNF248Q8NDW4 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZNF248Q8NDW4 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ZNF248Q8NDW4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ZNF248Q8NDW4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
ZNF248Q8NDW4 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.44■□□□□ 0.86
ZNF248Q8NDW4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZNF248Q8NDW4 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.44■□□□□ 0.86
ZNF248Q8NDW4 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.44■□□□□ 0.86
ZNF248Q8NDW4 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.44■□□□□ 0.86
ZNF248Q8NDW4 AP001160.3-201ENST00000601484 763 ntBASIC20.44■□□□□ 0.86
ZNF248Q8NDW4 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
ZNF248Q8NDW4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ZNF248Q8NDW4 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.44■□□□□ 0.86
ZNF248Q8NDW4 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZNF248Q8NDW4 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
ZNF248Q8NDW4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.44■□□□□ 0.86
ZNF248Q8NDW4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF248Q8NDW4 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF248Q8NDW4 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.43■□□□□ 0.86
ZNF248Q8NDW4 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.43■□□□□ 0.86
ZNF248Q8NDW4 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF248Q8NDW4 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF248Q8NDW4 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF248Q8NDW4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.43■□□□□ 0.86
ZNF248Q8NDW4 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF248Q8NDW4 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
ZNF248Q8NDW4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF248Q8NDW4 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF248Q8NDW4 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.42■□□□□ 0.86
ZNF248Q8NDW4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF248Q8NDW4 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.42■□□□□ 0.86
ZNF248Q8NDW4 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF248Q8NDW4 RNA5SP413-201ENST00000516373 109 ntBASIC20.42■□□□□ 0.86
ZNF248Q8NDW4 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
ZNF248Q8NDW4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.42■□□□□ 0.86
ZNF248Q8NDW4 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF248Q8NDW4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.42■□□□□ 0.86
ZNF248Q8NDW4 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
ZNF248Q8NDW4 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF248Q8NDW4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
ZNF248Q8NDW4 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
ZNF248Q8NDW4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF248Q8NDW4 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF248Q8NDW4 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF248Q8NDW4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
ZNF248Q8NDW4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF248Q8NDW4 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF248Q8NDW4 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
ZNF248Q8NDW4 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
ZNF248Q8NDW4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.41■□□□□ 0.86
ZNF248Q8NDW4 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF248Q8NDW4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
ZNF248Q8NDW4 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.41■□□□□ 0.86
ZNF248Q8NDW4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF248Q8NDW4 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF248Q8NDW4 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
ZNF248Q8NDW4 PKD1P6-201ENST00000343738 4769 ntBASIC20.41■□□□□ 0.86
ZNF248Q8NDW4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.4■□□□□ 0.86
ZNF248Q8NDW4 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF248Q8NDW4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
ZNF248Q8NDW4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF248Q8NDW4 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
ZNF248Q8NDW4 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF248Q8NDW4 CNN2P6-201ENST00000439038 900 ntBASIC20.4■□□□□ 0.86
ZNF248Q8NDW4 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.4■□□□□ 0.86
ZNF248Q8NDW4 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.4■□□□□ 0.86
ZNF248Q8NDW4 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF248Q8NDW4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF248Q8NDW4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.4■□□□□ 0.86
ZNF248Q8NDW4 AC098934.4-201ENST00000564127 592 ntBASIC20.4■□□□□ 0.86
ZNF248Q8NDW4 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF248Q8NDW4 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
ZNF248Q8NDW4 AP006294.2-201ENST00000641667 209 ntBASIC20.4■□□□□ 0.86
ZNF248Q8NDW4 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
ZNF248Q8NDW4 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
ZNF248Q8NDW4 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.39■□□□□ 0.86
ZNF248Q8NDW4 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ZNF248Q8NDW4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.39■□□□□ 0.86
ZNF248Q8NDW4 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.86
ZNF248Q8NDW4 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ZNF248Q8NDW4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.39■□□□□ 0.85
ZNF248Q8NDW4 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZNF248Q8NDW4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
ZNF248Q8NDW4 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZNF248Q8NDW4 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZNF248Q8NDW4 DUSP8P5-201ENST00000422884 1815 ntBASIC20.39■□□□□ 0.85
ZNF248Q8NDW4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZNF248Q8NDW4 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.38■□□□□ 0.85
ZNF248Q8NDW4 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
ZNF248Q8NDW4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF248Q8NDW4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.38■□□□□ 0.85
ZNF248Q8NDW4 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.38■□□□□ 0.85
ZNF248Q8NDW4 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF248Q8NDW4 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.38■□□□□ 0.85
ZNF248Q8NDW4 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF248Q8NDW4 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms