Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 AL136162.1-201ENST00000607711 1078 ntBASIC17.7■□□□□ 0.42
ZNF439Q8NDP4 OXCT2P1-201ENST00000447263 1535 ntBASIC17.7■□□□□ 0.42
ZNF439Q8NDP4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF439Q8NDP4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF439Q8NDP4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF439Q8NDP4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF439Q8NDP4 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF439Q8NDP4 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF439Q8NDP4 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF439Q8NDP4 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF439Q8NDP4 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF439Q8NDP4 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF439Q8NDP4 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF439Q8NDP4 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.69■□□□□ 0.42
ZNF439Q8NDP4 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
ZNF439Q8NDP4 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.69■□□□□ 0.42
ZNF439Q8NDP4 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF439Q8NDP4 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF439Q8NDP4 OR7E47P-201ENST00000546390 1422 ntBASIC17.69■□□□□ 0.42
ZNF439Q8NDP4 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF439Q8NDP4 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.69■□□□□ 0.42
ZNF439Q8NDP4 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
ZNF439Q8NDP4 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF439Q8NDP4 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
ZNF439Q8NDP4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF439Q8NDP4 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF439Q8NDP4 FAM99A-202ENST00000538190 1989 ntBASIC17.68■□□□□ 0.42
ZNF439Q8NDP4 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF439Q8NDP4 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF439Q8NDP4 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
ZNF439Q8NDP4 BX842568.3-201ENST00000418104 571 ntBASIC17.68■□□□□ 0.42
ZNF439Q8NDP4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
ZNF439Q8NDP4 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.68■□□□□ 0.42
ZNF439Q8NDP4 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF439Q8NDP4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.68■□□□□ 0.42
ZNF439Q8NDP4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.68■□□□□ 0.42
ZNF439Q8NDP4 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
ZNF439Q8NDP4 AC135279.3-201ENST00000610945 1311 ntBASIC17.68■□□□□ 0.42
ZNF439Q8NDP4 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ZNF439Q8NDP4 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF439Q8NDP4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF439Q8NDP4 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF439Q8NDP4 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF439Q8NDP4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.67■□□□□ 0.42
ZNF439Q8NDP4 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC17.67■□□□□ 0.42
ZNF439Q8NDP4 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
ZNF439Q8NDP4 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.67■□□□□ 0.42
ZNF439Q8NDP4 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.67■□□□□ 0.42
ZNF439Q8NDP4 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF439Q8NDP4 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.67■□□□□ 0.42
ZNF439Q8NDP4 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF439Q8NDP4 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF439Q8NDP4 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.67■□□□□ 0.42
ZNF439Q8NDP4 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF439Q8NDP4 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF439Q8NDP4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.67■□□□□ 0.42
ZNF439Q8NDP4 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
ZNF439Q8NDP4 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.67■□□□□ 0.42
ZNF439Q8NDP4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF439Q8NDP4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
ZNF439Q8NDP4 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
ZNF439Q8NDP4 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF439Q8NDP4 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF439Q8NDP4 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF439Q8NDP4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
ZNF439Q8NDP4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF439Q8NDP4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.66■□□□□ 0.42
ZNF439Q8NDP4 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.66■□□□□ 0.42
ZNF439Q8NDP4 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.66■□□□□ 0.42
ZNF439Q8NDP4 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.66■□□□□ 0.42
ZNF439Q8NDP4 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF439Q8NDP4 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF439Q8NDP4 AC010542.4-201ENST00000563151 1910 ntBASIC17.66■□□□□ 0.42
ZNF439Q8NDP4 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.66■□□□□ 0.42
ZNF439Q8NDP4 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF439Q8NDP4 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF439Q8NDP4 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.66■□□□□ 0.42
ZNF439Q8NDP4 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF439Q8NDP4 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF439Q8NDP4 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF439Q8NDP4 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
ZNF439Q8NDP4 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF439Q8NDP4 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF439Q8NDP4 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF439Q8NDP4 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF439Q8NDP4 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.65■□□□□ 0.42
ZNF439Q8NDP4 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.65■□□□□ 0.42
ZNF439Q8NDP4 AC096631.2-201ENST00000436136 790 ntBASIC17.65■□□□□ 0.42
ZNF439Q8NDP4 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.65■□□□□ 0.42
ZNF439Q8NDP4 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
ZNF439Q8NDP4 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.65■□□□□ 0.42
ZNF439Q8NDP4 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF439Q8NDP4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
ZNF439Q8NDP4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ZNF439Q8NDP4 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF439Q8NDP4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.64■□□□□ 0.41
ZNF439Q8NDP4 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.64■□□□□ 0.41
ZNF439Q8NDP4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF439Q8NDP4 AC233992.3-201ENST00000607491 485 ntBASIC17.64■□□□□ 0.41
ZNF439Q8NDP4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms