Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRIML2Q8N7C3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRIML2Q8N7C3 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
TRIML2Q8N7C3 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
TRIML2Q8N7C3 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
TRIML2Q8N7C3 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
TRIML2Q8N7C3 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TRIML2Q8N7C3 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
TRIML2Q8N7C3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIML2Q8N7C3 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
TRIML2Q8N7C3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TRIML2Q8N7C3 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIML2Q8N7C3 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIML2Q8N7C3 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIML2Q8N7C3 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRIML2Q8N7C3 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIML2Q8N7C3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRIML2Q8N7C3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.57■□□□□ 0.88
TRIML2Q8N7C3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.57■□□□□ 0.88
TRIML2Q8N7C3 UNC93B8-201ENST00000511903 705 ntBASIC20.57■□□□□ 0.88
TRIML2Q8N7C3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.57■□□□□ 0.88
TRIML2Q8N7C3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.57■□□□□ 0.88
TRIML2Q8N7C3 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
TRIML2Q8N7C3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.57■□□□□ 0.88
TRIML2Q8N7C3 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.57■□□□□ 0.88
TRIML2Q8N7C3 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.57■□□□□ 0.88
TRIML2Q8N7C3 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
TRIML2Q8N7C3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.57■□□□□ 0.88
TRIML2Q8N7C3 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIML2Q8N7C3 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIML2Q8N7C3 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIML2Q8N7C3 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
TRIML2Q8N7C3 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.56■□□□□ 0.88
TRIML2Q8N7C3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
TRIML2Q8N7C3 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRIML2Q8N7C3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TRIML2Q8N7C3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TRIML2Q8N7C3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
TRIML2Q8N7C3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TRIML2Q8N7C3 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.55■□□□□ 0.88
TRIML2Q8N7C3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
TRIML2Q8N7C3 AC005229.4-201ENST00000610085 2198 ntBASIC20.55■□□□□ 0.88
TRIML2Q8N7C3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIML2Q8N7C3 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIML2Q8N7C3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.55■□□□□ 0.88
TRIML2Q8N7C3 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
TRIML2Q8N7C3 KRT16P3-201ENST00000439127 1283 ntBASIC20.55■□□□□ 0.88
TRIML2Q8N7C3 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRIML2Q8N7C3 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
TRIML2Q8N7C3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.55■□□□□ 0.88
TRIML2Q8N7C3 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
TRIML2Q8N7C3 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIML2Q8N7C3 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIML2Q8N7C3 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIML2Q8N7C3 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIML2Q8N7C3 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIML2Q8N7C3 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.54■□□□□ 0.88
TRIML2Q8N7C3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
TRIML2Q8N7C3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIML2Q8N7C3 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIML2Q8N7C3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIML2Q8N7C3 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.54■□□□□ 0.88
TRIML2Q8N7C3 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIML2Q8N7C3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIML2Q8N7C3 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.54■□□□□ 0.88
TRIML2Q8N7C3 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
TRIML2Q8N7C3 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIML2Q8N7C3 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIML2Q8N7C3 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.54■□□□□ 0.88
TRIML2Q8N7C3 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIML2Q8N7C3 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIML2Q8N7C3 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIML2Q8N7C3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIML2Q8N7C3 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIML2Q8N7C3 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIML2Q8N7C3 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.53■□□□□ 0.88
TRIML2Q8N7C3 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIML2Q8N7C3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
TRIML2Q8N7C3 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIML2Q8N7C3 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.53■□□□□ 0.88
TRIML2Q8N7C3 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
TRIML2Q8N7C3 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIML2Q8N7C3 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIML2Q8N7C3 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.52■□□□□ 0.88
TRIML2Q8N7C3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIML2Q8N7C3 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIML2Q8N7C3 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIML2Q8N7C3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIML2Q8N7C3 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
TRIML2Q8N7C3 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.52■□□□□ 0.88
TRIML2Q8N7C3 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIML2Q8N7C3 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIML2Q8N7C3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRIML2Q8N7C3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRIML2Q8N7C3 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIML2Q8N7C3 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIML2Q8N7C3 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIML2Q8N7C3 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.51■□□□□ 0.87
TRIML2Q8N7C3 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.51■□□□□ 0.87
TRIML2Q8N7C3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms