Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC22.56■■□□□ 1.2
TTC9BQ8N6N2 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
TTC9BQ8N6N2 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
TTC9BQ8N6N2 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.56■■□□□ 1.2
TTC9BQ8N6N2 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC22.56■■□□□ 1.2
TTC9BQ8N6N2 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TTC9BQ8N6N2 AC080038.3-201ENST00000623346 1952 ntBASIC22.56■■□□□ 1.2
TTC9BQ8N6N2 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TTC9BQ8N6N2 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TTC9BQ8N6N2 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TTC9BQ8N6N2 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC22.55■■□□□ 1.2
TTC9BQ8N6N2 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TTC9BQ8N6N2 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TTC9BQ8N6N2 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
TTC9BQ8N6N2 MAP2K4P1-201ENST00000438453 1195 ntBASIC22.55■■□□□ 1.2
TTC9BQ8N6N2 PPP1R14BP3-201ENST00000509033 445 ntBASIC22.55■■□□□ 1.2
TTC9BQ8N6N2 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TTC9BQ8N6N2 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TTC9BQ8N6N2 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TTC9BQ8N6N2 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC22.55■■□□□ 1.2
TTC9BQ8N6N2 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
TTC9BQ8N6N2 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
TTC9BQ8N6N2 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.55■■□□□ 1.2
TTC9BQ8N6N2 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TTC9BQ8N6N2 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22.54■■□□□ 1.2
TTC9BQ8N6N2 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TTC9BQ8N6N2 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TTC9BQ8N6N2 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TTC9BQ8N6N2 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TTC9BQ8N6N2 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TTC9BQ8N6N2 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC22.54■■□□□ 1.2
TTC9BQ8N6N2 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.54■■□□□ 1.2
TTC9BQ8N6N2 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.54■■□□□ 1.2
TTC9BQ8N6N2 AC010141.2-201ENST00000452426 721 ntBASIC22.54■■□□□ 1.2
TTC9BQ8N6N2 DENND3-207ENST00000518347 850 ntTSL 2 BASIC22.54■■□□□ 1.2
TTC9BQ8N6N2 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC22.54■■□□□ 1.2
TTC9BQ8N6N2 AC138907.5-202ENST00000569484 235 ntBASIC22.54■■□□□ 1.2
TTC9BQ8N6N2 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC22.54■■□□□ 1.2
TTC9BQ8N6N2 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TTC9BQ8N6N2 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TTC9BQ8N6N2 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.53■■□□□ 1.2
TTC9BQ8N6N2 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.53■■□□□ 1.2
TTC9BQ8N6N2 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
TTC9BQ8N6N2 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
TTC9BQ8N6N2 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.53■■□□□ 1.2
TTC9BQ8N6N2 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TTC9BQ8N6N2 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TTC9BQ8N6N2 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TTC9BQ8N6N2 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC22.53■■□□□ 1.2
TTC9BQ8N6N2 MIR663A-201ENST00000385250 93 ntBASIC22.53■■□□□ 1.2
TTC9BQ8N6N2 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC22.53■■□□□ 1.2
TTC9BQ8N6N2 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC22.53■■□□□ 1.2
TTC9BQ8N6N2 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
TTC9BQ8N6N2 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TTC9BQ8N6N2 MAZ-216ENST00000616501 991 ntTSL 5 BASIC22.53■■□□□ 1.2
TTC9BQ8N6N2 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC22.53■■□□□ 1.2
TTC9BQ8N6N2 MYCNOS-205ENST00000641950 531 ntBASIC22.53■■□□□ 1.2
TTC9BQ8N6N2 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TTC9BQ8N6N2 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TTC9BQ8N6N2 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
TTC9BQ8N6N2 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC22.53■■□□□ 1.2
TTC9BQ8N6N2 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TTC9BQ8N6N2 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
TTC9BQ8N6N2 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
TTC9BQ8N6N2 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
TTC9BQ8N6N2 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC22.52■■□□□ 1.2
TTC9BQ8N6N2 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TTC9BQ8N6N2 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC22.52■■□□□ 1.2
TTC9BQ8N6N2 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC22.52■■□□□ 1.2
TTC9BQ8N6N2 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TTC9BQ8N6N2 AC006970.2-201ENST00000450065 779 ntBASIC22.52■■□□□ 1.2
TTC9BQ8N6N2 BRI3-207ENST00000539286 699 ntTSL 2 BASIC22.52■■□□□ 1.2
TTC9BQ8N6N2 DUX4L16-201ENST00000555130 1264 ntBASIC22.52■■□□□ 1.2
TTC9BQ8N6N2 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
TTC9BQ8N6N2 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC22.52■■□□□ 1.2
TTC9BQ8N6N2 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC22.52■■□□□ 1.2
TTC9BQ8N6N2 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC22.52■■□□□ 1.2
TTC9BQ8N6N2 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TTC9BQ8N6N2 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
TTC9BQ8N6N2 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TTC9BQ8N6N2 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC22.51■■□□□ 1.19
TTC9BQ8N6N2 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
TTC9BQ8N6N2 EEF1DP3-203ENST00000566025 782 ntBASIC22.51■■□□□ 1.19
TTC9BQ8N6N2 TFG-210ENST00000620299 1289 ntTSL 5 BASIC22.51■■□□□ 1.19
TTC9BQ8N6N2 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TTC9BQ8N6N2 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TTC9BQ8N6N2 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
TTC9BQ8N6N2 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TTC9BQ8N6N2 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
TTC9BQ8N6N2 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TTC9BQ8N6N2 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TTC9BQ8N6N2 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC22.5■■□□□ 1.19
TTC9BQ8N6N2 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC22.5■■□□□ 1.19
TTC9BQ8N6N2 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TTC9BQ8N6N2 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC22.5■■□□□ 1.19
TTC9BQ8N6N2 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.5■■□□□ 1.19
TTC9BQ8N6N2 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.5■■□□□ 1.19
TTC9BQ8N6N2 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC22.5■■□□□ 1.19
TTC9BQ8N6N2 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC22.5■■□□□ 1.19
TTC9BQ8N6N2 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 349.4 ms