Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COMMD1Q8N668 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COMMD1Q8N668 SYT6-210ENST00000641643 1587 ntBASIC17.66■□□□□ 0.42
COMMD1Q8N668 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
COMMD1Q8N668 AC007952.6-201ENST00000573168 2673 ntBASIC17.65■□□□□ 0.42
COMMD1Q8N668 AC003957.1-201ENST00000625108 2673 ntBASIC17.65■□□□□ 0.42
COMMD1Q8N668 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
COMMD1Q8N668 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.65■□□□□ 0.42
COMMD1Q8N668 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.65■□□□□ 0.42
COMMD1Q8N668 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
COMMD1Q8N668 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
COMMD1Q8N668 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
COMMD1Q8N668 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COMMD1Q8N668 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COMMD1Q8N668 MIR638-201ENST00000385237 100 ntBASIC17.65■□□□□ 0.42
COMMD1Q8N668 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.65■□□□□ 0.42
COMMD1Q8N668 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COMMD1Q8N668 AC106739.1-201ENST00000617035 715 ntBASIC17.65■□□□□ 0.42
COMMD1Q8N668 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
COMMD1Q8N668 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.65■□□□□ 0.42
COMMD1Q8N668 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COMMD1Q8N668 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.64■□□□□ 0.41
COMMD1Q8N668 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
COMMD1Q8N668 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.64■□□□□ 0.41
COMMD1Q8N668 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
COMMD1Q8N668 UNC93B3-201ENST00000308076 687 ntBASIC17.64■□□□□ 0.41
COMMD1Q8N668 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.64■□□□□ 0.41
COMMD1Q8N668 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
COMMD1Q8N668 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.64■□□□□ 0.41
COMMD1Q8N668 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COMMD1Q8N668 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
COMMD1Q8N668 USF2-207ENST00000595068 1612 ntTSL 5 BASIC17.64■□□□□ 0.41
COMMD1Q8N668 AC010542.4-201ENST00000563151 1910 ntBASIC17.64■□□□□ 0.41
COMMD1Q8N668 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COMMD1Q8N668 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.64■□□□□ 0.41
COMMD1Q8N668 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
COMMD1Q8N668 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COMMD1Q8N668 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COMMD1Q8N668 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC17.63■□□□□ 0.41
COMMD1Q8N668 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
COMMD1Q8N668 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.63■□□□□ 0.41
COMMD1Q8N668 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
COMMD1Q8N668 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
COMMD1Q8N668 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COMMD1Q8N668 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.63■□□□□ 0.41
COMMD1Q8N668 PBX2P1-201ENST00000493219 1291 ntBASIC17.63■□□□□ 0.41
COMMD1Q8N668 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COMMD1Q8N668 AL136162.1-201ENST00000607711 1078 ntBASIC17.63■□□□□ 0.41
COMMD1Q8N668 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.63■□□□□ 0.41
COMMD1Q8N668 AC135279.3-201ENST00000610945 1311 ntBASIC17.63■□□□□ 0.41
COMMD1Q8N668 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
COMMD1Q8N668 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COMMD1Q8N668 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COMMD1Q8N668 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.63■□□□□ 0.41
COMMD1Q8N668 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
COMMD1Q8N668 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.63■□□□□ 0.41
COMMD1Q8N668 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
COMMD1Q8N668 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
COMMD1Q8N668 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
COMMD1Q8N668 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COMMD1Q8N668 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
COMMD1Q8N668 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.62■□□□□ 0.41
COMMD1Q8N668 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.62■□□□□ 0.41
COMMD1Q8N668 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.62■□□□□ 0.41
COMMD1Q8N668 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COMMD1Q8N668 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COMMD1Q8N668 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.62■□□□□ 0.41
COMMD1Q8N668 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COMMD1Q8N668 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COMMD1Q8N668 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COMMD1Q8N668 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COMMD1Q8N668 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
COMMD1Q8N668 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COMMD1Q8N668 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
COMMD1Q8N668 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COMMD1Q8N668 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COMMD1Q8N668 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COMMD1Q8N668 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
COMMD1Q8N668 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COMMD1Q8N668 EDA-201ENST00000338901 1233 ntBASIC17.61■□□□□ 0.41
COMMD1Q8N668 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.61■□□□□ 0.41
COMMD1Q8N668 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COMMD1Q8N668 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.61■□□□□ 0.41
COMMD1Q8N668 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COMMD1Q8N668 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.61■□□□□ 0.41
COMMD1Q8N668 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
COMMD1Q8N668 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COMMD1Q8N668 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COMMD1Q8N668 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COMMD1Q8N668 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
COMMD1Q8N668 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COMMD1Q8N668 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COMMD1Q8N668 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COMMD1Q8N668 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COMMD1Q8N668 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COMMD1Q8N668 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
COMMD1Q8N668 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
COMMD1Q8N668 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.6■□□□□ 0.41
COMMD1Q8N668 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COMMD1Q8N668 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms