Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
TRIM50Q86XT4 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
TRIM50Q86XT4 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TRIM50Q86XT4 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TRIM50Q86XT4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
TRIM50Q86XT4 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TRIM50Q86XT4 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC23.91■■□□□ 1.42
TRIM50Q86XT4 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TRIM50Q86XT4 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
TRIM50Q86XT4 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
TRIM50Q86XT4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC23.91■■□□□ 1.42
TRIM50Q86XT4 AC104771.1-201ENST00000603335 964 ntBASIC23.91■■□□□ 1.42
TRIM50Q86XT4 MAZ-216ENST00000616501 991 ntTSL 5 BASIC23.91■■□□□ 1.42
TRIM50Q86XT4 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.91■■□□□ 1.42
TRIM50Q86XT4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
TRIM50Q86XT4 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.91■■□□□ 1.42
TRIM50Q86XT4 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.91■■□□□ 1.42
TRIM50Q86XT4 AC139530.1-201ENST00000575312 1977 ntBASIC23.91■■□□□ 1.42
TRIM50Q86XT4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TRIM50Q86XT4 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
TRIM50Q86XT4 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
TRIM50Q86XT4 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
TRIM50Q86XT4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
TRIM50Q86XT4 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.9■■□□□ 1.42
TRIM50Q86XT4 METTL26-203ENST00000397664 604 ntTSL 2 BASIC23.9■■□□□ 1.42
TRIM50Q86XT4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC23.9■■□□□ 1.42
TRIM50Q86XT4 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC23.9■■□□□ 1.42
TRIM50Q86XT4 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC23.9■■□□□ 1.42
TRIM50Q86XT4 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC23.9■■□□□ 1.42
TRIM50Q86XT4 MYCNOS-205ENST00000641950 531 ntBASIC23.9■■□□□ 1.42
TRIM50Q86XT4 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TRIM50Q86XT4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TRIM50Q86XT4 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC23.9■■□□□ 1.42
TRIM50Q86XT4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
TRIM50Q86XT4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TRIM50Q86XT4 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.9■■□□□ 1.42
TRIM50Q86XT4 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TRIM50Q86XT4 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC23.9■■□□□ 1.42
TRIM50Q86XT4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
TRIM50Q86XT4 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
TRIM50Q86XT4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
TRIM50Q86XT4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
TRIM50Q86XT4 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
TRIM50Q86XT4 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
TRIM50Q86XT4 AC010141.2-201ENST00000452426 721 ntBASIC23.89■■□□□ 1.41
TRIM50Q86XT4 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC23.89■■□□□ 1.41
TRIM50Q86XT4 BRI3-207ENST00000539286 699 ntTSL 2 BASIC23.89■■□□□ 1.41
TRIM50Q86XT4 AL034346.1-201ENST00000568244 1277 ntBASIC23.89■■□□□ 1.41
TRIM50Q86XT4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
TRIM50Q86XT4 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC23.89■■□□□ 1.41
TRIM50Q86XT4 WT1-AS_3.1-201ENST00000613262 234 ntBASIC23.89■■□□□ 1.41
TRIM50Q86XT4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TRIM50Q86XT4 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TRIM50Q86XT4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
TRIM50Q86XT4 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
TRIM50Q86XT4 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.88■■□□□ 1.41
TRIM50Q86XT4 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRIM50Q86XT4 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRIM50Q86XT4 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.88■■□□□ 1.41
TRIM50Q86XT4 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRIM50Q86XT4 FXN-202ENST00000396364 980 ntTSL 5 BASIC23.88■■□□□ 1.41
TRIM50Q86XT4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
TRIM50Q86XT4 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
TRIM50Q86XT4 DUX4L16-201ENST00000555130 1264 ntBASIC23.88■■□□□ 1.41
TRIM50Q86XT4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRIM50Q86XT4 AL050303.2-201ENST00000619798 666 ntBASIC23.88■■□□□ 1.41
TRIM50Q86XT4 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRIM50Q86XT4 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRIM50Q86XT4 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC23.88■■□□□ 1.41
TRIM50Q86XT4 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
TRIM50Q86XT4 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRIM50Q86XT4 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM50Q86XT4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
TRIM50Q86XT4 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM50Q86XT4 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.87■■□□□ 1.41
TRIM50Q86XT4 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC23.87■■□□□ 1.41
TRIM50Q86XT4 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM50Q86XT4 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.87■■□□□ 1.41
TRIM50Q86XT4 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM50Q86XT4 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM50Q86XT4 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM50Q86XT4 AC138907.5-202ENST00000569484 235 ntBASIC23.87■■□□□ 1.41
TRIM50Q86XT4 TFG-210ENST00000620299 1289 ntTSL 5 BASIC23.87■■□□□ 1.41
TRIM50Q86XT4 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM50Q86XT4 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM50Q86XT4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRIM50Q86XT4 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
TRIM50Q86XT4 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRIM50Q86XT4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC23.86■■□□□ 1.41
TRIM50Q86XT4 NCF1B-203ENST00000435988 1254 ntBASIC23.86■■□□□ 1.41
TRIM50Q86XT4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TRIM50Q86XT4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC23.86■■□□□ 1.41
TRIM50Q86XT4 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TRIM50Q86XT4 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRIM50Q86XT4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC23.86■■□□□ 1.41
TRIM50Q86XT4 MDK-213ENST00000617138 635 ntTSL 2 BASIC23.86■■□□□ 1.41
TRIM50Q86XT4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC23.86■■□□□ 1.41
TRIM50Q86XT4 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRIM50Q86XT4 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
TRIM50Q86XT4 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms