Protein–RNA interactions for Protein: Q86UC2

RSPH3, Radial spoke head protein 3 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPH3Q86UC2 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RSPH3Q86UC2 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
RSPH3Q86UC2 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.59■■□□□ 1.37
RSPH3Q86UC2 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.59■■□□□ 1.37
RSPH3Q86UC2 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
RSPH3Q86UC2 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.59■■□□□ 1.37
RSPH3Q86UC2 AC083906.2-201ENST00000511578 360 ntBASIC23.59■■□□□ 1.37
RSPH3Q86UC2 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
RSPH3Q86UC2 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RSPH3Q86UC2 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RSPH3Q86UC2 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
RSPH3Q86UC2 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
RSPH3Q86UC2 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
RSPH3Q86UC2 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
RSPH3Q86UC2 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
RSPH3Q86UC2 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.58■■□□□ 1.37
RSPH3Q86UC2 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
RSPH3Q86UC2 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
RSPH3Q86UC2 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC23.58■■□□□ 1.37
RSPH3Q86UC2 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC23.58■■□□□ 1.37
RSPH3Q86UC2 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
RSPH3Q86UC2 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.36
RSPH3Q86UC2 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC23.57■■□□□ 1.36
RSPH3Q86UC2 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.57■■□□□ 1.36
RSPH3Q86UC2 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RSPH3Q86UC2 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RSPH3Q86UC2 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RSPH3Q86UC2 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RSPH3Q86UC2 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.57■■□□□ 1.36
RSPH3Q86UC2 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC23.57■■□□□ 1.36
RSPH3Q86UC2 AP006587.3-201ENST00000525742 1516 ntBASIC23.57■■□□□ 1.36
RSPH3Q86UC2 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RSPH3Q86UC2 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC23.57■■□□□ 1.36
RSPH3Q86UC2 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.56■■□□□ 1.36
RSPH3Q86UC2 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC23.56■■□□□ 1.36
RSPH3Q86UC2 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RSPH3Q86UC2 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RSPH3Q86UC2 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC23.56■■□□□ 1.36
RSPH3Q86UC2 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RSPH3Q86UC2 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC23.56■■□□□ 1.36
RSPH3Q86UC2 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RSPH3Q86UC2 AC053503.5-201ENST00000601508 636 ntBASIC23.56■■□□□ 1.36
RSPH3Q86UC2 AL050303.2-201ENST00000619798 666 ntBASIC23.56■■□□□ 1.36
RSPH3Q86UC2 AC010536.3-201ENST00000620306 533 ntBASIC23.56■■□□□ 1.36
RSPH3Q86UC2 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RSPH3Q86UC2 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
RSPH3Q86UC2 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.55■■□□□ 1.36
RSPH3Q86UC2 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RSPH3Q86UC2 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.55■■□□□ 1.36
RSPH3Q86UC2 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC23.55■■□□□ 1.36
RSPH3Q86UC2 EEF1DP3-203ENST00000566025 782 ntBASIC23.55■■□□□ 1.36
RSPH3Q86UC2 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RSPH3Q86UC2 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RSPH3Q86UC2 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RSPH3Q86UC2 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
RSPH3Q86UC2 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RSPH3Q86UC2 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.55■■□□□ 1.36
RSPH3Q86UC2 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
RSPH3Q86UC2 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
RSPH3Q86UC2 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
RSPH3Q86UC2 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RSPH3Q86UC2 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RSPH3Q86UC2 SLC29A4P1-201ENST00000398760 971 ntBASIC23.54■■□□□ 1.36
RSPH3Q86UC2 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
RSPH3Q86UC2 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
RSPH3Q86UC2 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC23.54■■□□□ 1.36
RSPH3Q86UC2 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC23.54■■□□□ 1.36
RSPH3Q86UC2 TSPY6P-201ENST00000448518 926 ntBASIC23.54■■□□□ 1.36
RSPH3Q86UC2 OAS3-207ENST00000551007 998 ntTSL 2 BASIC23.54■■□□□ 1.36
RSPH3Q86UC2 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC23.54■■□□□ 1.36
RSPH3Q86UC2 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
RSPH3Q86UC2 SLC7A5P1-201ENST00000568957 537 ntBASIC23.54■■□□□ 1.36
RSPH3Q86UC2 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC23.54■■□□□ 1.36
RSPH3Q86UC2 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RSPH3Q86UC2 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RSPH3Q86UC2 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC23.54■■□□□ 1.36
RSPH3Q86UC2 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC23.54■■□□□ 1.36
RSPH3Q86UC2 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RSPH3Q86UC2 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC23.54■■□□□ 1.36
RSPH3Q86UC2 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.54■■□□□ 1.36
RSPH3Q86UC2 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RSPH3Q86UC2 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC23.53■■□□□ 1.36
RSPH3Q86UC2 AC142086.2-201ENST00000569753 217 ntBASIC23.53■■□□□ 1.36
RSPH3Q86UC2 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC23.53■■□□□ 1.36
RSPH3Q86UC2 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
RSPH3Q86UC2 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC23.52■■□□□ 1.36
RSPH3Q86UC2 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
RSPH3Q86UC2 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC23.52■■□□□ 1.36
RSPH3Q86UC2 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
RSPH3Q86UC2 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
RSPH3Q86UC2 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.52■■□□□ 1.36
RSPH3Q86UC2 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
RSPH3Q86UC2 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RSPH3Q86UC2 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RSPH3Q86UC2 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RSPH3Q86UC2 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC23.52■■□□□ 1.36
RSPH3Q86UC2 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.52■■□□□ 1.36
RSPH3Q86UC2 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.52■■□□□ 1.35
RSPH3Q86UC2 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
RSPH3Q86UC2 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms