Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
PPP4R4Q6NUP7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.41■□□□□ 0.86
PPP4R4Q6NUP7 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.41■□□□□ 0.86
PPP4R4Q6NUP7 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.41■□□□□ 0.86
PPP4R4Q6NUP7 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
PPP4R4Q6NUP7 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PPP4R4Q6NUP7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.41■□□□□ 0.86
PPP4R4Q6NUP7 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
PPP4R4Q6NUP7 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PPP4R4Q6NUP7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
PPP4R4Q6NUP7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PPP4R4Q6NUP7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.4■□□□□ 0.86
PPP4R4Q6NUP7 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
PPP4R4Q6NUP7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PPP4R4Q6NUP7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.4■□□□□ 0.86
PPP4R4Q6NUP7 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PPP4R4Q6NUP7 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PPP4R4Q6NUP7 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
PPP4R4Q6NUP7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.4■□□□□ 0.86
PPP4R4Q6NUP7 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
PPP4R4Q6NUP7 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
PPP4R4Q6NUP7 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PPP4R4Q6NUP7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
PPP4R4Q6NUP7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
PPP4R4Q6NUP7 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.39■□□□□ 0.85
PPP4R4Q6NUP7 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PPP4R4Q6NUP7 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
PPP4R4Q6NUP7 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PPP4R4Q6NUP7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.39■□□□□ 0.85
PPP4R4Q6NUP7 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
PPP4R4Q6NUP7 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
PPP4R4Q6NUP7 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PPP4R4Q6NUP7 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.38■□□□□ 0.85
PPP4R4Q6NUP7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.38■□□□□ 0.85
PPP4R4Q6NUP7 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PPP4R4Q6NUP7 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
PPP4R4Q6NUP7 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
PPP4R4Q6NUP7 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.38■□□□□ 0.85
PPP4R4Q6NUP7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
PPP4R4Q6NUP7 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.38■□□□□ 0.85
PPP4R4Q6NUP7 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PPP4R4Q6NUP7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.38■□□□□ 0.85
PPP4R4Q6NUP7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PPP4R4Q6NUP7 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PPP4R4Q6NUP7 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PPP4R4Q6NUP7 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.37■□□□□ 0.85
PPP4R4Q6NUP7 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PPP4R4Q6NUP7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PPP4R4Q6NUP7 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PPP4R4Q6NUP7 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
PPP4R4Q6NUP7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
PPP4R4Q6NUP7 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PPP4R4Q6NUP7 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PPP4R4Q6NUP7 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PPP4R4Q6NUP7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PPP4R4Q6NUP7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
PPP4R4Q6NUP7 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.37■□□□□ 0.85
PPP4R4Q6NUP7 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PPP4R4Q6NUP7 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PPP4R4Q6NUP7 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PPP4R4Q6NUP7 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PPP4R4Q6NUP7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.36■□□□□ 0.85
PPP4R4Q6NUP7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
PPP4R4Q6NUP7 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
PPP4R4Q6NUP7 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PPP4R4Q6NUP7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PPP4R4Q6NUP7 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
PPP4R4Q6NUP7 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PPP4R4Q6NUP7 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PPP4R4Q6NUP7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.36■□□□□ 0.85
PPP4R4Q6NUP7 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
PPP4R4Q6NUP7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.36■□□□□ 0.85
PPP4R4Q6NUP7 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.36■□□□□ 0.85
PPP4R4Q6NUP7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.36■□□□□ 0.85
PPP4R4Q6NUP7 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PPP4R4Q6NUP7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
PPP4R4Q6NUP7 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PPP4R4Q6NUP7 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
PPP4R4Q6NUP7 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PPP4R4Q6NUP7 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PPP4R4Q6NUP7 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PPP4R4Q6NUP7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PPP4R4Q6NUP7 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PPP4R4Q6NUP7 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PPP4R4Q6NUP7 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PPP4R4Q6NUP7 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PPP4R4Q6NUP7 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PPP4R4Q6NUP7 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PPP4R4Q6NUP7 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PPP4R4Q6NUP7 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.35■□□□□ 0.85
PPP4R4Q6NUP7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
PPP4R4Q6NUP7 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PPP4R4Q6NUP7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
PPP4R4Q6NUP7 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
PPP4R4Q6NUP7 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PPP4R4Q6NUP7 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PPP4R4Q6NUP7 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
PPP4R4Q6NUP7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PPP4R4Q6NUP7 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PPP4R4Q6NUP7 Z98882.1-201ENST00000622160 2253 ntBASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms