Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ARFGEF3Q5TH69 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ARFGEF3Q5TH69 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ARFGEF3Q5TH69 CROCCP5-201ENST00000436658 830 ntBASIC18.21■□□□□ 0.51
ARFGEF3Q5TH69 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ARFGEF3Q5TH69 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.21■□□□□ 0.51
ARFGEF3Q5TH69 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ARFGEF3Q5TH69 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.2■□□□□ 0.5
ARFGEF3Q5TH69 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ARFGEF3Q5TH69 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.2■□□□□ 0.5
ARFGEF3Q5TH69 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.2■□□□□ 0.5
ARFGEF3Q5TH69 AC080038.1-201ENST00000611274 1154 ntBASIC18.2■□□□□ 0.5
ARFGEF3Q5TH69 MYCNOS-205ENST00000641950 531 ntBASIC18.2■□□□□ 0.5
ARFGEF3Q5TH69 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.2■□□□□ 0.5
ARFGEF3Q5TH69 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
ARFGEF3Q5TH69 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
ARFGEF3Q5TH69 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ARFGEF3Q5TH69 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ARFGEF3Q5TH69 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
ARFGEF3Q5TH69 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.2■□□□□ 0.5
ARFGEF3Q5TH69 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.2■□□□□ 0.5
ARFGEF3Q5TH69 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.2■□□□□ 0.5
ARFGEF3Q5TH69 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ARFGEF3Q5TH69 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.19■□□□□ 0.5
ARFGEF3Q5TH69 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ARFGEF3Q5TH69 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.19■□□□□ 0.5
ARFGEF3Q5TH69 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ARFGEF3Q5TH69 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.19■□□□□ 0.5
ARFGEF3Q5TH69 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ARFGEF3Q5TH69 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ARFGEF3Q5TH69 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.19■□□□□ 0.5
ARFGEF3Q5TH69 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
ARFGEF3Q5TH69 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ARFGEF3Q5TH69 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
ARFGEF3Q5TH69 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.18■□□□□ 0.5
ARFGEF3Q5TH69 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.18■□□□□ 0.5
ARFGEF3Q5TH69 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.18■□□□□ 0.5
ARFGEF3Q5TH69 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ARFGEF3Q5TH69 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ARFGEF3Q5TH69 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ARFGEF3Q5TH69 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
ARFGEF3Q5TH69 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.18■□□□□ 0.5
ARFGEF3Q5TH69 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.18■□□□□ 0.5
ARFGEF3Q5TH69 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ARFGEF3Q5TH69 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ARFGEF3Q5TH69 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ARFGEF3Q5TH69 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
ARFGEF3Q5TH69 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ARFGEF3Q5TH69 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ARFGEF3Q5TH69 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ARFGEF3Q5TH69 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ARFGEF3Q5TH69 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.17■□□□□ 0.5
ARFGEF3Q5TH69 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.17■□□□□ 0.5
ARFGEF3Q5TH69 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ARFGEF3Q5TH69 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.17■□□□□ 0.5
ARFGEF3Q5TH69 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ARFGEF3Q5TH69 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.17■□□□□ 0.5
ARFGEF3Q5TH69 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
ARFGEF3Q5TH69 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ARFGEF3Q5TH69 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ARFGEF3Q5TH69 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ARFGEF3Q5TH69 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ARFGEF3Q5TH69 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.17■□□□□ 0.5
ARFGEF3Q5TH69 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
ARFGEF3Q5TH69 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.17■□□□□ 0.5
ARFGEF3Q5TH69 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.17■□□□□ 0.5
ARFGEF3Q5TH69 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.17■□□□□ 0.5
ARFGEF3Q5TH69 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.17■□□□□ 0.5
ARFGEF3Q5TH69 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.17■□□□□ 0.5
ARFGEF3Q5TH69 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ARFGEF3Q5TH69 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ARFGEF3Q5TH69 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ARFGEF3Q5TH69 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
ARFGEF3Q5TH69 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ARFGEF3Q5TH69 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ARFGEF3Q5TH69 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.16■□□□□ 0.5
ARFGEF3Q5TH69 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
ARFGEF3Q5TH69 EEF1DP3-203ENST00000566025 782 ntBASIC18.16■□□□□ 0.5
ARFGEF3Q5TH69 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.16■□□□□ 0.5
ARFGEF3Q5TH69 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
ARFGEF3Q5TH69 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ARFGEF3Q5TH69 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ARFGEF3Q5TH69 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.16■□□□□ 0.5
ARFGEF3Q5TH69 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ARFGEF3Q5TH69 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ARFGEF3Q5TH69 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ARFGEF3Q5TH69 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
ARFGEF3Q5TH69 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.15■□□□□ 0.5
ARFGEF3Q5TH69 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ARFGEF3Q5TH69 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.15■□□□□ 0.5
ARFGEF3Q5TH69 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.15■□□□□ 0.5
ARFGEF3Q5TH69 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.15■□□□□ 0.5
ARFGEF3Q5TH69 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
ARFGEF3Q5TH69 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ARFGEF3Q5TH69 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
ARFGEF3Q5TH69 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.15■□□□□ 0.5
ARFGEF3Q5TH69 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ARFGEF3Q5TH69 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.15■□□□□ 0.5
ARFGEF3Q5TH69 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ARFGEF3Q5TH69 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms