Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
COL13A1Q5TAT6 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
COL13A1Q5TAT6 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC24.63■■□□□ 1.53
COL13A1Q5TAT6 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
COL13A1Q5TAT6 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
COL13A1Q5TAT6 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
COL13A1Q5TAT6 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
COL13A1Q5TAT6 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC24.63■■□□□ 1.53
COL13A1Q5TAT6 MIR6786-201ENST00000616843 113 ntBASIC24.63■■□□□ 1.53
COL13A1Q5TAT6 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
COL13A1Q5TAT6 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC24.62■■□□□ 1.53
COL13A1Q5TAT6 AC009237.3-201ENST00000393279 1427 ntBASIC24.62■■□□□ 1.53
COL13A1Q5TAT6 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
COL13A1Q5TAT6 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
COL13A1Q5TAT6 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
COL13A1Q5TAT6 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC24.62■■□□□ 1.53
COL13A1Q5TAT6 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
COL13A1Q5TAT6 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC24.62■■□□□ 1.53
COL13A1Q5TAT6 LSM12P1-201ENST00000411836 588 ntBASIC24.62■■□□□ 1.53
COL13A1Q5TAT6 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC24.62■■□□□ 1.53
COL13A1Q5TAT6 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC24.62■■□□□ 1.53
COL13A1Q5TAT6 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
COL13A1Q5TAT6 AC068587.7-201ENST00000641602 218 ntBASIC24.62■■□□□ 1.53
COL13A1Q5TAT6 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
COL13A1Q5TAT6 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC24.62■■□□□ 1.53
COL13A1Q5TAT6 ALDH1A3-203ENST00000557963 1670 ntBASIC24.62■■□□□ 1.53
COL13A1Q5TAT6 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC24.62■■□□□ 1.53
COL13A1Q5TAT6 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
COL13A1Q5TAT6 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC24.61■■□□□ 1.53
COL13A1Q5TAT6 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
COL13A1Q5TAT6 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
COL13A1Q5TAT6 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
COL13A1Q5TAT6 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC24.61■■□□□ 1.53
COL13A1Q5TAT6 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC24.61■■□□□ 1.53
COL13A1Q5TAT6 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC24.61■■□□□ 1.53
COL13A1Q5TAT6 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
COL13A1Q5TAT6 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC24.61■■□□□ 1.53
COL13A1Q5TAT6 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
COL13A1Q5TAT6 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC24.6■■□□□ 1.53
COL13A1Q5TAT6 AP000593.1-201ENST00000393668 712 ntBASIC24.6■■□□□ 1.53
COL13A1Q5TAT6 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
COL13A1Q5TAT6 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC24.6■■□□□ 1.53
COL13A1Q5TAT6 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC24.6■■□□□ 1.53
COL13A1Q5TAT6 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC24.6■■□□□ 1.53
COL13A1Q5TAT6 AC145285.6-201ENST00000604632 637 ntBASIC24.6■■□□□ 1.53
COL13A1Q5TAT6 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
COL13A1Q5TAT6 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
COL13A1Q5TAT6 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
COL13A1Q5TAT6 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
COL13A1Q5TAT6 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
COL13A1Q5TAT6 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
COL13A1Q5TAT6 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
COL13A1Q5TAT6 KRT18P48-201ENST00000434763 852 ntBASIC24.59■■□□□ 1.53
COL13A1Q5TAT6 NME6-213ENST00000451657 871 ntTSL 2 BASIC24.59■■□□□ 1.53
COL13A1Q5TAT6 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
COL13A1Q5TAT6 DUX4L26-201ENST00000489078 1255 ntBASIC24.59■■□□□ 1.53
COL13A1Q5TAT6 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC24.59■■□□□ 1.53
COL13A1Q5TAT6 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
COL13A1Q5TAT6 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
COL13A1Q5TAT6 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC24.58■■□□□ 1.53
COL13A1Q5TAT6 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
COL13A1Q5TAT6 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
COL13A1Q5TAT6 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
COL13A1Q5TAT6 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC24.58■■□□□ 1.53
COL13A1Q5TAT6 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC24.58■■□□□ 1.53
COL13A1Q5TAT6 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC24.58■■□□□ 1.53
COL13A1Q5TAT6 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
COL13A1Q5TAT6 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC24.58■■□□□ 1.53
COL13A1Q5TAT6 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.52
COL13A1Q5TAT6 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
COL13A1Q5TAT6 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
COL13A1Q5TAT6 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
COL13A1Q5TAT6 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
COL13A1Q5TAT6 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
COL13A1Q5TAT6 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
COL13A1Q5TAT6 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
COL13A1Q5TAT6 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
COL13A1Q5TAT6 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC24.57■■□□□ 1.52
COL13A1Q5TAT6 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
COL13A1Q5TAT6 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC24.57■■□□□ 1.52
COL13A1Q5TAT6 PNMA6B-201ENST00000538162 1200 ntBASIC24.57■■□□□ 1.52
COL13A1Q5TAT6 RBM42-202ENST00000586618 771 ntTSL 3 BASIC24.57■■□□□ 1.52
COL13A1Q5TAT6 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
COL13A1Q5TAT6 AC006538.3-201ENST00000612495 578 ntBASIC24.57■■□□□ 1.52
COL13A1Q5TAT6 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
COL13A1Q5TAT6 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC24.57■■□□□ 1.52
COL13A1Q5TAT6 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
COL13A1Q5TAT6 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
COL13A1Q5TAT6 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
COL13A1Q5TAT6 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
COL13A1Q5TAT6 CD37-213ENST00000598095 1598 ntTSL 2 BASIC24.56■■□□□ 1.52
COL13A1Q5TAT6 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
COL13A1Q5TAT6 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
COL13A1Q5TAT6 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC24.56■■□□□ 1.52
COL13A1Q5TAT6 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
COL13A1Q5TAT6 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC24.56■■□□□ 1.52
COL13A1Q5TAT6 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
COL13A1Q5TAT6 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
COL13A1Q5TAT6 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
COL13A1Q5TAT6 PXK-203ENST00000383715 1756 ntTSL 5 BASIC24.55■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms