Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UBR4Q5T4S7 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC11.97□□□□□ -0.49
UBR4Q5T4S7 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC11.97□□□□□ -0.49
UBR4Q5T4S7 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC11.97□□□□□ -0.49
UBR4Q5T4S7 AC010980.2-201ENST00000587099 1412 ntBASIC11.97□□□□□ -0.49
UBR4Q5T4S7 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
UBR4Q5T4S7 GATS-209ENST00000454084 1030 ntTSL 3 BASIC11.96□□□□□ -0.49
UBR4Q5T4S7 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC11.96□□□□□ -0.49
UBR4Q5T4S7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC11.96□□□□□ -0.49
UBR4Q5T4S7 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
UBR4Q5T4S7 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
UBR4Q5T4S7 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
UBR4Q5T4S7 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC11.96□□□□□ -0.49
UBR4Q5T4S7 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
UBR4Q5T4S7 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
UBR4Q5T4S7 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
UBR4Q5T4S7 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
UBR4Q5T4S7 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
UBR4Q5T4S7 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
UBR4Q5T4S7 IPPK-202ENST00000375522 882 ntTSL 3 BASIC11.96□□□□□ -0.49
UBR4Q5T4S7 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
UBR4Q5T4S7 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
UBR4Q5T4S7 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC11.96□□□□□ -0.5
UBR4Q5T4S7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC11.96□□□□□ -0.5
UBR4Q5T4S7 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
UBR4Q5T4S7 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC11.96□□□□□ -0.5
UBR4Q5T4S7 SERP1-208ENST00000491660 830 ntTSL 2 BASIC11.96□□□□□ -0.5
UBR4Q5T4S7 AL022069.1-201ENST00000568025 1636 ntBASIC11.96□□□□□ -0.5
UBR4Q5T4S7 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC11.96□□□□□ -0.5
UBR4Q5T4S7 TK2-204ENST00000525974 1178 ntTSL 2 BASIC11.95□□□□□ -0.5
UBR4Q5T4S7 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC11.95□□□□□ -0.5
UBR4Q5T4S7 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC11.95□□□□□ -0.5
UBR4Q5T4S7 AC069544.1-201ENST00000609399 999 ntBASIC11.95□□□□□ -0.5
UBR4Q5T4S7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
UBR4Q5T4S7 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
UBR4Q5T4S7 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
UBR4Q5T4S7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
UBR4Q5T4S7 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
UBR4Q5T4S7 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC11.95□□□□□ -0.5
UBR4Q5T4S7 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC11.95□□□□□ -0.5
UBR4Q5T4S7 KRT8P9-201ENST00000558927 1449 ntBASIC11.95□□□□□ -0.5
UBR4Q5T4S7 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
UBR4Q5T4S7 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
UBR4Q5T4S7 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC11.95□□□□□ -0.5
UBR4Q5T4S7 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
UBR4Q5T4S7 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC11.95□□□□□ -0.5
UBR4Q5T4S7 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC11.95□□□□□ -0.5
UBR4Q5T4S7 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
UBR4Q5T4S7 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
UBR4Q5T4S7 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
UBR4Q5T4S7 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC11.94□□□□□ -0.5
UBR4Q5T4S7 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
UBR4Q5T4S7 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
UBR4Q5T4S7 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
UBR4Q5T4S7 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC11.94□□□□□ -0.5
UBR4Q5T4S7 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
UBR4Q5T4S7 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
UBR4Q5T4S7 SLC29A4P2-201ENST00000504749 1089 ntBASIC11.94□□□□□ -0.5
UBR4Q5T4S7 PP7080-204ENST00000510714 601 ntTSL 3 BASIC11.94□□□□□ -0.5
UBR4Q5T4S7 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC11.94□□□□□ -0.5
UBR4Q5T4S7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
UBR4Q5T4S7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
UBR4Q5T4S7 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
UBR4Q5T4S7 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC11.94□□□□□ -0.5
UBR4Q5T4S7 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC11.94□□□□□ -0.5
UBR4Q5T4S7 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
UBR4Q5T4S7 DUX4L26-201ENST00000489078 1255 ntBASIC11.94□□□□□ -0.5
UBR4Q5T4S7 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
UBR4Q5T4S7 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
UBR4Q5T4S7 MMP23A-201ENST00000234610 1017 ntBASIC11.93□□□□□ -0.5
UBR4Q5T4S7 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UBR4Q5T4S7 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
UBR4Q5T4S7 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
UBR4Q5T4S7 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC11.93□□□□□ -0.5
UBR4Q5T4S7 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC11.93□□□□□ -0.5
UBR4Q5T4S7 AC005363.2-201ENST00000618631 242 ntBASIC11.93□□□□□ -0.5
UBR4Q5T4S7 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC11.93□□□□□ -0.5
UBR4Q5T4S7 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UBR4Q5T4S7 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC11.93□□□□□ -0.5
UBR4Q5T4S7 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC11.93□□□□□ -0.5
UBR4Q5T4S7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC11.93□□□□□ -0.5
UBR4Q5T4S7 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC11.93□□□□□ -0.5
UBR4Q5T4S7 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
UBR4Q5T4S7 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UBR4Q5T4S7 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
UBR4Q5T4S7 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UBR4Q5T4S7 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC11.93□□□□□ -0.5
UBR4Q5T4S7 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
UBR4Q5T4S7 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC11.93□□□□□ -0.5
UBR4Q5T4S7 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
UBR4Q5T4S7 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UBR4Q5T4S7 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
UBR4Q5T4S7 SERPINH1P1-201ENST00000419794 1249 ntBASIC11.92□□□□□ -0.5
UBR4Q5T4S7 AC104076.2-201ENST00000448912 469 ntBASIC11.92□□□□□ -0.5
UBR4Q5T4S7 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
UBR4Q5T4S7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC11.92□□□□□ -0.5
UBR4Q5T4S7 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
UBR4Q5T4S7 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
UBR4Q5T4S7 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC11.92□□□□□ -0.5
UBR4Q5T4S7 MFF-207ENST00000409565 1548 ntTSL 2 BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 157.1 ms