Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RSPO1Q2MKA7 AC003102.1-202ENST00000563394 1796 ntBASIC18.61■□□□□ 0.57
RSPO1Q2MKA7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.61■□□□□ 0.57
RSPO1Q2MKA7 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RSPO1Q2MKA7 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.61■□□□□ 0.57
RSPO1Q2MKA7 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RSPO1Q2MKA7 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.61■□□□□ 0.57
RSPO1Q2MKA7 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.61■□□□□ 0.57
RSPO1Q2MKA7 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.6■□□□□ 0.57
RSPO1Q2MKA7 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.6■□□□□ 0.57
RSPO1Q2MKA7 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.6■□□□□ 0.57
RSPO1Q2MKA7 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RSPO1Q2MKA7 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RSPO1Q2MKA7 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RSPO1Q2MKA7 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RSPO1Q2MKA7 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RSPO1Q2MKA7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.6■□□□□ 0.57
RSPO1Q2MKA7 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RSPO1Q2MKA7 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.6■□□□□ 0.57
RSPO1Q2MKA7 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.6■□□□□ 0.57
RSPO1Q2MKA7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RSPO1Q2MKA7 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RSPO1Q2MKA7 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.6■□□□□ 0.57
RSPO1Q2MKA7 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RSPO1Q2MKA7 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.6■□□□□ 0.57
RSPO1Q2MKA7 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
RSPO1Q2MKA7 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RSPO1Q2MKA7 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.59■□□□□ 0.57
RSPO1Q2MKA7 MIR572-201ENST00000384983 95 ntBASIC18.59■□□□□ 0.57
RSPO1Q2MKA7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.59■□□□□ 0.57
RSPO1Q2MKA7 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.59■□□□□ 0.57
RSPO1Q2MKA7 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.59■□□□□ 0.57
RSPO1Q2MKA7 AC005837.3-201ENST00000612163 286 ntBASIC18.59■□□□□ 0.57
RSPO1Q2MKA7 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RSPO1Q2MKA7 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RSPO1Q2MKA7 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RSPO1Q2MKA7 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
RSPO1Q2MKA7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.59■□□□□ 0.57
RSPO1Q2MKA7 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RSPO1Q2MKA7 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RSPO1Q2MKA7 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RSPO1Q2MKA7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.59■□□□□ 0.57
RSPO1Q2MKA7 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RSPO1Q2MKA7 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RSPO1Q2MKA7 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RSPO1Q2MKA7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RSPO1Q2MKA7 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RSPO1Q2MKA7 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
RSPO1Q2MKA7 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
RSPO1Q2MKA7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.58■□□□□ 0.57
RSPO1Q2MKA7 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.58■□□□□ 0.57
RSPO1Q2MKA7 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RSPO1Q2MKA7 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.58■□□□□ 0.57
RSPO1Q2MKA7 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RSPO1Q2MKA7 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RSPO1Q2MKA7 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RSPO1Q2MKA7 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.58■□□□□ 0.56
RSPO1Q2MKA7 AC105233.4-201ENST00000642045 216 ntBASIC18.58■□□□□ 0.56
RSPO1Q2MKA7 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RSPO1Q2MKA7 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RSPO1Q2MKA7 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RSPO1Q2MKA7 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.58■□□□□ 0.56
RSPO1Q2MKA7 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RSPO1Q2MKA7 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
RSPO1Q2MKA7 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RSPO1Q2MKA7 Z98882.1-201ENST00000622160 2253 ntBASIC18.57■□□□□ 0.56
RSPO1Q2MKA7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RSPO1Q2MKA7 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.57■□□□□ 0.56
RSPO1Q2MKA7 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RSPO1Q2MKA7 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RSPO1Q2MKA7 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.57■□□□□ 0.56
RSPO1Q2MKA7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
RSPO1Q2MKA7 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.57■□□□□ 0.56
RSPO1Q2MKA7 AP006587.3-201ENST00000525742 1516 ntBASIC18.57■□□□□ 0.56
RSPO1Q2MKA7 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RSPO1Q2MKA7 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.57■□□□□ 0.56
RSPO1Q2MKA7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RSPO1Q2MKA7 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
RSPO1Q2MKA7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.56■□□□□ 0.56
RSPO1Q2MKA7 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RSPO1Q2MKA7 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RSPO1Q2MKA7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.56■□□□□ 0.56
RSPO1Q2MKA7 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RSPO1Q2MKA7 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RSPO1Q2MKA7 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.56■□□□□ 0.56
RSPO1Q2MKA7 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.56■□□□□ 0.56
RSPO1Q2MKA7 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RSPO1Q2MKA7 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.56■□□□□ 0.56
RSPO1Q2MKA7 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.55■□□□□ 0.56
RSPO1Q2MKA7 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RSPO1Q2MKA7 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
RSPO1Q2MKA7 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RSPO1Q2MKA7 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RSPO1Q2MKA7 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.55■□□□□ 0.56
RSPO1Q2MKA7 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.55■□□□□ 0.56
RSPO1Q2MKA7 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RSPO1Q2MKA7 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.55■□□□□ 0.56
RSPO1Q2MKA7 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RSPO1Q2MKA7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.54■□□□□ 0.56
RSPO1Q2MKA7 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms