Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.61■□□□□ 0.89
HMGCS1Q01581 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.61■□□□□ 0.89
HMGCS1Q01581 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HMGCS1Q01581 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HMGCS1Q01581 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.6■□□□□ 0.89
HMGCS1Q01581 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HMGCS1Q01581 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
HMGCS1Q01581 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.6■□□□□ 0.89
HMGCS1Q01581 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.6■□□□□ 0.89
HMGCS1Q01581 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HMGCS1Q01581 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.6■□□□□ 0.89
HMGCS1Q01581 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.6■□□□□ 0.89
HMGCS1Q01581 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.6■□□□□ 0.89
HMGCS1Q01581 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.6■□□□□ 0.89
HMGCS1Q01581 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.6■□□□□ 0.89
HMGCS1Q01581 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
HMGCS1Q01581 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HMGCS1Q01581 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HMGCS1Q01581 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.6■□□□□ 0.89
HMGCS1Q01581 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HMGCS1Q01581 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HMGCS1Q01581 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.59■□□□□ 0.89
HMGCS1Q01581 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HMGCS1Q01581 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.59■□□□□ 0.89
HMGCS1Q01581 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HMGCS1Q01581 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.59■□□□□ 0.89
HMGCS1Q01581 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.59■□□□□ 0.89
HMGCS1Q01581 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HMGCS1Q01581 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HMGCS1Q01581 AP005435.1-201ENST00000529293 1178 ntBASIC20.59■□□□□ 0.89
HMGCS1Q01581 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.59■□□□□ 0.89
HMGCS1Q01581 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.59■□□□□ 0.89
HMGCS1Q01581 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HMGCS1Q01581 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.59■□□□□ 0.89
HMGCS1Q01581 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HMGCS1Q01581 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HMGCS1Q01581 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HMGCS1Q01581 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HMGCS1Q01581 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
HMGCS1Q01581 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HMGCS1Q01581 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HMGCS1Q01581 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.58■□□□□ 0.89
HMGCS1Q01581 AF106564.1-201ENST00000607058 2553 ntBASIC20.58■□□□□ 0.88
HMGCS1Q01581 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HMGCS1Q01581 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HMGCS1Q01581 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HMGCS1Q01581 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
HMGCS1Q01581 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMGCS1Q01581 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
HMGCS1Q01581 UNC93B3-201ENST00000308076 687 ntBASIC20.57■□□□□ 0.88
HMGCS1Q01581 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMGCS1Q01581 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.57■□□□□ 0.88
HMGCS1Q01581 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.57■□□□□ 0.88
HMGCS1Q01581 MIR4767-201ENST00000582827 78 ntBASIC20.57■□□□□ 0.88
HMGCS1Q01581 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMGCS1Q01581 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMGCS1Q01581 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMGCS1Q01581 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
HMGCS1Q01581 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HMGCS1Q01581 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.56■□□□□ 0.88
HMGCS1Q01581 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMGCS1Q01581 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMGCS1Q01581 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMGCS1Q01581 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HMGCS1Q01581 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HMGCS1Q01581 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HMGCS1Q01581 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
HMGCS1Q01581 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.56■□□□□ 0.88
HMGCS1Q01581 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.56■□□□□ 0.88
HMGCS1Q01581 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMGCS1Q01581 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.55■□□□□ 0.88
HMGCS1Q01581 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
HMGCS1Q01581 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMGCS1Q01581 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
HMGCS1Q01581 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.55■□□□□ 0.88
HMGCS1Q01581 AP004607.7-201ENST00000527152 1677 ntBASIC20.55■□□□□ 0.88
HMGCS1Q01581 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMGCS1Q01581 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.55■□□□□ 0.88
HMGCS1Q01581 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMGCS1Q01581 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
HMGCS1Q01581 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.55■□□□□ 0.88
HMGCS1Q01581 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.55■□□□□ 0.88
HMGCS1Q01581 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.55■□□□□ 0.88
HMGCS1Q01581 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMGCS1Q01581 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.55■□□□□ 0.88
HMGCS1Q01581 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
HMGCS1Q01581 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMGCS1Q01581 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.55■□□□□ 0.88
HMGCS1Q01581 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMGCS1Q01581 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
HMGCS1Q01581 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMGCS1Q01581 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.55■□□□□ 0.88
HMGCS1Q01581 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMGCS1Q01581 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.54■□□□□ 0.88
HMGCS1Q01581 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMGCS1Q01581 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMGCS1Q01581 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMGCS1Q01581 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HMGCS1Q01581 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMGCS1Q01581 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms