Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
HTRA3P83110 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC25.34■■□□□ 1.65
HTRA3P83110 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
HTRA3P83110 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
HTRA3P83110 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
HTRA3P83110 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
HTRA3P83110 KRT17P3-201ENST00000420566 1262 ntBASIC25.34■■□□□ 1.65
HTRA3P83110 AC012618.2-201ENST00000428058 849 ntBASIC25.34■■□□□ 1.65
HTRA3P83110 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC25.34■■□□□ 1.65
HTRA3P83110 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC25.34■■□□□ 1.65
HTRA3P83110 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
HTRA3P83110 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
HTRA3P83110 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
HTRA3P83110 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
HTRA3P83110 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
HTRA3P83110 TK2-204ENST00000525974 1178 ntTSL 2 BASIC25.33■■□□□ 1.65
HTRA3P83110 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC25.33■■□□□ 1.65
HTRA3P83110 RMI2-205ENST00000576027 818 ntTSL 2 BASIC25.33■■□□□ 1.65
HTRA3P83110 USF2-205ENST00000594064 1179 ntTSL 2 BASIC25.33■■□□□ 1.65
HTRA3P83110 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
HTRA3P83110 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC25.32■■□□□ 1.64
HTRA3P83110 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
HTRA3P83110 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
HTRA3P83110 AC092803.2-201ENST00000564287 1899 ntBASIC25.32■■□□□ 1.64
HTRA3P83110 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC25.32■■□□□ 1.64
HTRA3P83110 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
HTRA3P83110 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC25.32■■□□□ 1.64
HTRA3P83110 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
HTRA3P83110 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
HTRA3P83110 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
HTRA3P83110 TPM4P1-201ENST00000436100 807 ntBASIC25.32■■□□□ 1.64
HTRA3P83110 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
HTRA3P83110 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
HTRA3P83110 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC25.32■■□□□ 1.64
HTRA3P83110 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC25.32■■□□□ 1.64
HTRA3P83110 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC25.32■■□□□ 1.64
HTRA3P83110 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC25.32■■□□□ 1.64
HTRA3P83110 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
HTRA3P83110 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
HTRA3P83110 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
HTRA3P83110 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
HTRA3P83110 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC25.31■■□□□ 1.64
HTRA3P83110 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC25.31■■□□□ 1.64
HTRA3P83110 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC25.31■■□□□ 1.64
HTRA3P83110 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC25.31■■□□□ 1.64
HTRA3P83110 AC060766.5-201ENST00000590539 871 ntBASIC25.31■■□□□ 1.64
HTRA3P83110 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
HTRA3P83110 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
HTRA3P83110 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
HTRA3P83110 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
HTRA3P83110 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
HTRA3P83110 LSM12P1-201ENST00000411836 588 ntBASIC25.3■■□□□ 1.64
HTRA3P83110 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC25.3■■□□□ 1.64
HTRA3P83110 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
HTRA3P83110 AL355075.4-201ENST00000554988 638 ntBASIC25.3■■□□□ 1.64
HTRA3P83110 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC25.3■■□□□ 1.64
HTRA3P83110 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC25.3■■□□□ 1.64
HTRA3P83110 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.3■■□□□ 1.64
HTRA3P83110 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
HTRA3P83110 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
HTRA3P83110 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC25.29■■□□□ 1.64
HTRA3P83110 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
HTRA3P83110 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
HTRA3P83110 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
HTRA3P83110 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC25.29■■□□□ 1.64
HTRA3P83110 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC25.29■■□□□ 1.64
HTRA3P83110 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC25.29■■□□□ 1.64
HTRA3P83110 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
HTRA3P83110 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
HTRA3P83110 USP45-205ENST00000472914 1617 ntTSL 5 BASIC25.28■■□□□ 1.64
HTRA3P83110 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
HTRA3P83110 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC25.28■■□□□ 1.64
HTRA3P83110 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
HTRA3P83110 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC25.28■■□□□ 1.64
HTRA3P83110 DHDH-203ENST00000522614 776 ntTSL 5 BASIC25.28■■□□□ 1.64
HTRA3P83110 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
HTRA3P83110 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
HTRA3P83110 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC25.28■■□□□ 1.64
HTRA3P83110 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
HTRA3P83110 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
HTRA3P83110 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
HTRA3P83110 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
HTRA3P83110 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
HTRA3P83110 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
HTRA3P83110 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC25.27■■□□□ 1.64
HTRA3P83110 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC25.27■■□□□ 1.64
HTRA3P83110 AL049637.2-201ENST00000641778 930 ntBASIC25.27■■□□□ 1.64
HTRA3P83110 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
HTRA3P83110 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC25.27■■□□□ 1.64
HTRA3P83110 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
HTRA3P83110 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC25.26■■□□□ 1.63
HTRA3P83110 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC25.26■■□□□ 1.63
HTRA3P83110 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
HTRA3P83110 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
HTRA3P83110 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC25.26■■□□□ 1.63
HTRA3P83110 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC25.26■■□□□ 1.63
HTRA3P83110 AC069544.1-201ENST00000609399 999 ntBASIC25.26■■□□□ 1.63
HTRA3P83110 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC25.26■■□□□ 1.63
HTRA3P83110 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
HTRA3P83110 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC25.26■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms