Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL20P78556 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCL20P78556 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC16.86■□□□□ 0.29
CCL20P78556 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL20P78556 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL20P78556 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL20P78556 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL20P78556 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL20P78556 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL20P78556 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC16.86■□□□□ 0.29
CCL20P78556 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL20P78556 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
CCL20P78556 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC16.86■□□□□ 0.29
CCL20P78556 AP005212.1-201ENST00000581547 1997 ntBASIC16.86■□□□□ 0.29
CCL20P78556 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.86■□□□□ 0.29
CCL20P78556 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
CCL20P78556 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC16.85■□□□□ 0.29
CCL20P78556 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.85■□□□□ 0.29
CCL20P78556 AC009831.1-201ENST00000580420 1582 ntBASIC16.85■□□□□ 0.29
CCL20P78556 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.85■□□□□ 0.29
CCL20P78556 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.85■□□□□ 0.29
CCL20P78556 AC073314.1-201ENST00000568729 2216 ntBASIC16.85■□□□□ 0.29
CCL20P78556 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCL20P78556 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCL20P78556 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCL20P78556 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCL20P78556 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CCL20P78556 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC16.85■□□□□ 0.29
CCL20P78556 MLEC-202ENST00000412616 841 ntTSL 3 BASIC16.85■□□□□ 0.29
CCL20P78556 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCL20P78556 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC16.85■□□□□ 0.29
CCL20P78556 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCL20P78556 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CCL20P78556 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC16.85■□□□□ 0.29
CCL20P78556 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.85■□□□□ 0.29
CCL20P78556 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC16.85■□□□□ 0.29
CCL20P78556 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC16.85■□□□□ 0.29
CCL20P78556 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCL20P78556 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CCL20P78556 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCL20P78556 MFF-203ENST00000349901 1716 ntTSL 2 BASIC16.84■□□□□ 0.29
CCL20P78556 LINC01529-204ENST00000636474 1715 ntBASIC16.84■□□□□ 0.29
CCL20P78556 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CCL20P78556 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL20P78556 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.84■□□□□ 0.29
CCL20P78556 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CCL20P78556 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL20P78556 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.84■□□□□ 0.29
CCL20P78556 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL20P78556 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCL20P78556 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCL20P78556 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL20P78556 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCL20P78556 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCL20P78556 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC16.84■□□□□ 0.29
CCL20P78556 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCL20P78556 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCL20P78556 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCL20P78556 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CCL20P78556 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCL20P78556 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCL20P78556 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCL20P78556 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCL20P78556 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCL20P78556 MACF1-219ENST00000484793 834 ntTSL 2 BASIC16.83■□□□□ 0.28
CCL20P78556 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CCL20P78556 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC16.83■□□□□ 0.28
CCL20P78556 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.83■□□□□ 0.28
CCL20P78556 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CCL20P78556 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCL20P78556 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCL20P78556 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.82■□□□□ 0.28
CCL20P78556 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
CCL20P78556 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CCL20P78556 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCL20P78556 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC16.82■□□□□ 0.28
CCL20P78556 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC16.82■□□□□ 0.28
CCL20P78556 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CCL20P78556 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCL20P78556 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCL20P78556 AC018755.3-202ENST00000596210 929 ntBASIC16.82■□□□□ 0.28
CCL20P78556 AC133552.2-201ENST00000619106 1032 ntBASIC16.82■□□□□ 0.28
CCL20P78556 GAK-223ENST00000628912 497 ntTSL 5 BASIC16.82■□□□□ 0.28
CCL20P78556 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCL20P78556 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.82■□□□□ 0.28
CCL20P78556 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCL20P78556 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCL20P78556 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.82■□□□□ 0.28
CCL20P78556 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCL20P78556 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CCL20P78556 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.82■□□□□ 0.28
CCL20P78556 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL20P78556 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL20P78556 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL20P78556 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL20P78556 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL20P78556 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CCL20P78556 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL20P78556 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL20P78556 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms