Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
GABREP78334 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GABREP78334 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.39■□□□□ 0.85
GABREP78334 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
GABREP78334 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.39■□□□□ 0.85
GABREP78334 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.39■□□□□ 0.85
GABREP78334 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
GABREP78334 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
GABREP78334 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.39■□□□□ 0.85
GABREP78334 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.39■□□□□ 0.85
GABREP78334 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.39■□□□□ 0.85
GABREP78334 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GABREP78334 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.39■□□□□ 0.85
GABREP78334 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
GABREP78334 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GABREP78334 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GABREP78334 ABCB10P4-201ENST00000566803 2184 ntBASIC20.38■□□□□ 0.85
GABREP78334 AC068338.2-201ENST00000563278 1430 ntBASIC20.38■□□□□ 0.85
GABREP78334 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
GABREP78334 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
GABREP78334 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
GABREP78334 PRORSD1P-201ENST00000295112 541 ntBASIC20.38■□□□□ 0.85
GABREP78334 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.38■□□□□ 0.85
GABREP78334 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.38■□□□□ 0.85
GABREP78334 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.38■□□□□ 0.85
GABREP78334 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
GABREP78334 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GABREP78334 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GABREP78334 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GABREP78334 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
GABREP78334 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GABREP78334 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GABREP78334 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GABREP78334 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GABREP78334 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GABREP78334 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GABREP78334 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GABREP78334 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
GABREP78334 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GABREP78334 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.37■□□□□ 0.85
GABREP78334 AP004607.7-201ENST00000527152 1677 ntBASIC20.37■□□□□ 0.85
GABREP78334 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
GABREP78334 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GABREP78334 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.37■□□□□ 0.85
GABREP78334 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GABREP78334 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.37■□□□□ 0.85
GABREP78334 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.36■□□□□ 0.85
GABREP78334 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GABREP78334 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
GABREP78334 AC079089.2-201ENST00000531211 1277 ntBASIC20.36■□□□□ 0.85
GABREP78334 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
GABREP78334 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.36■□□□□ 0.85
GABREP78334 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.36■□□□□ 0.85
GABREP78334 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
GABREP78334 AC008694.1-202ENST00000636953 945 ntBASIC20.36■□□□□ 0.85
GABREP78334 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
GABREP78334 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.36■□□□□ 0.85
GABREP78334 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.35■□□□□ 0.85
GABREP78334 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
GABREP78334 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GABREP78334 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GABREP78334 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
GABREP78334 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
GABREP78334 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GABREP78334 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GABREP78334 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.35■□□□□ 0.85
GABREP78334 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.35■□□□□ 0.85
GABREP78334 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.35■□□□□ 0.85
GABREP78334 SLC7A5P1-201ENST00000568957 537 ntBASIC20.35■□□□□ 0.85
GABREP78334 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.35■□□□□ 0.85
GABREP78334 OR10C1-204ENST00000622521 1039 ntBASIC20.35■□□□□ 0.85
GABREP78334 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GABREP78334 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
GABREP78334 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
GABREP78334 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GABREP78334 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.35■□□□□ 0.85
GABREP78334 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.34■□□□□ 0.85
GABREP78334 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
GABREP78334 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
GABREP78334 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
GABREP78334 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GABREP78334 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GABREP78334 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.34■□□□□ 0.85
GABREP78334 RARRES2P4-201ENST00000514074 484 ntBASIC20.34■□□□□ 0.85
GABREP78334 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.34■□□□□ 0.85
GABREP78334 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
GABREP78334 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.34■□□□□ 0.85
GABREP78334 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
GABREP78334 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GABREP78334 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
GABREP78334 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
GABREP78334 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.33■□□□□ 0.85
GABREP78334 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
GABREP78334 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.33■□□□□ 0.85
GABREP78334 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
GABREP78334 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
GABREP78334 RPS2P52-201ENST00000469610 820 ntBASIC20.33■□□□□ 0.85
GABREP78334 AC007322.4-201ENST00000509611 723 ntBASIC20.33■□□□□ 0.85
GABREP78334 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.33■□□□□ 0.85
GABREP78334 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms